RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ARHGAP29Q52LW3 1261 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 FAM133BQ5BKY9 247 aaKnown RBP13.55□□□□□ -0.24
RAB5C-206ENST00000550406 RHBDF2Q6PJF5 856 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 FAM131BQ86XD5 332 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 UNC45BQ8IWX7 931 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 FAM217AQ8IXS0 508 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 AZIN2Q96A70 460 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 CHFRQ96EP1 664 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 MYEOVQ96EZ4 313 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 UHRF1Q96T88 793 aaPredicted RBP13.55□□□□□ -0.24
RAB5C-206ENST00000550406 DCLK3Q9C098 648 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 EBF3Q9H4W6 596 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.55□□□□□ -0.24
RAB5C-206ENST00000550406 DUS2Q9NX74 493 aaKnown RBP13.55□□□□□ -0.24
RAB5C-206ENST00000550406 MUTYHQ9UIF7 546 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 ANAPC7Q9UJX3 599 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 STOML2Q9UJZ1 356 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 DUSP12Q9UNI6 340 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 SORCS3Q9UPU3 1222 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 KIAA1549LQ6ZVL6 1849 aa13.55□□□□□ -0.24
RAB5C-206ENST00000550406 SHISA7A6NL88 538 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 ACSL4O60488 711 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 CCR1P32246 355 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 RDXP35241 583 aaKnown RBP13.54□□□□□ -0.24
RAB5C-206ENST00000550406 HARS2P49590 506 aaKnown RBP13.54□□□□□ -0.24
RAB5C-206ENST00000550406 NUGGCQ68CJ6 796 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 CC2D1AQ6P1N0 951 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-206ENST00000550406 CYP4V2Q6ZWL3 525 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-206ENST00000550406 YAF2Q8IY57 180 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 CCDC185Q8N715 623 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 TTC8Q8TAM2 541 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 RFFLQ8WZ73 363 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 PEBP4Q96S96 227 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 PRMT1Q99873 361 aaKnown RBP13.54□□□□□ -0.24
RAB5C-206ENST00000550406 TKTL2Q9H0I9 626 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 WDCPQ9H6R7 721 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 BRD9Q9H8M2 597 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 SLC2A4RGQ9NR83 387 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 THG1LQ9NWX6 298 aaKnown RBP13.54□□□□□ -0.24
RAB5C-206ENST00000550406 GTSE1Q9NYZ3 720 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 TBC1D14Q9P2M4 693 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 TRIM10Q9UDY6 481 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 LSM7Q9UK45 103 aaKnown RBP13.54□□□□□ -0.24
RAB5C-206ENST00000550406 ZNF510Q9Y2H8 683 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 SNX10Q9Y5X0 201 aa13.54□□□□□ -0.24
RAB5C-206ENST00000550406 A0A0A6YYK5 440 aaPredicted RBP13.53□□□□□ -0.24
RAB5C-206ENST00000550406 BTNL10A8MVZ5 291 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 TRDMT1O14717 391 aaKnown RBP13.53□□□□□ -0.24
RAB5C-206ENST00000550406 SLC9A3R1O14745 358 aaPredicted RBP13.53□□□□□ -0.24
RAB5C-206ENST00000550406 PAGE1O75459 146 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 LATS1O95835 1130 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 MOCS2O96007 188 aaPredicted RBP13.53□□□□□ -0.24
RAB5C-206ENST00000550406 CYP17A1P05093 508 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 SRFP11831 508 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 ADRA1BP35368 520 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 IFNAR2P48551 515 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 SGSHP51688 502 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 VCPP55072 806 aaKnown RBP13.53□□□□□ -0.24
RAB5C-206ENST00000550406 HADHBP55084 474 aaKnown RBP13.53□□□□□ -0.24
RAB5C-206ENST00000550406 KRT83P78385 493 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 RUNX3Q13761 415 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 PDGFRLQ15198 375 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 DHCR24Q15392 516 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 MS4A13Q5J8X5 152 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 BRMS1LQ5PSV4 323 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 ADGRF1Q5T601 910 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 PIK3R6Q5UE93 754 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 C14orf80Q86SX3 495 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 TMEM25Q86YD3 366 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 RHOT2Q8IXI1 618 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 CPXM2Q8N436 756 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 NIPA2Q8N8Q9 360 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 IRF7Q92985 503 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 RNF34Q969K3 372 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 OTUB2Q96DC9 234 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 ECT2Q9H8V3 914 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 TRPV5Q9NQA5 729 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 IP6K2Q9UHH9 426 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 HS3ST4Q9Y661 456 aa13.53□□□□□ -0.24
RAB5C-206ENST00000550406 MYO1FO00160 1098 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 LRCH4O75427 683 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 PROSCO94903 275 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 APOEP02649 317 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 PTMAP06454 111 aaKnown RBP13.52□□□□□ -0.25
RAB5C-206ENST00000550406 SLC2A3P11169 496 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 IL1R2P27930 398 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 MIPP30301 263 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 GGCXP38435 758 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 ARHGAP25P42331 645 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 MLLT6P55198 1093 aaPredicted RBP13.52□□□□□ -0.25
RAB5C-206ENST00000550406 PIGHQ14442 188 aaPredicted RBP13.52□□□□□ -0.25
RAB5C-206ENST00000550406 MESDQ14696 234 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 ACAP1Q15027 740 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 LY6G5CQ5SRR4 150 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 RAP1GAP2Q684P5 730 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 TXNRD3NBQ6F5E7 133 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 RFWD3Q6PCD5 774 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 SND1Q7KZF4 910 aaKnown RBP eCLIP13.52□□□□□ -0.25
RAB5C-206ENST00000550406 KIAA1328Q86T90 577 aa13.52□□□□□ -0.25
RAB5C-206ENST00000550406 ZNF683Q8IZ20 524 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms