RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 R4GN57 208 aa11.67□□□□□ -0.54
RAB5B-208ENST00000550283 WDR87Q6ZQQ6 2873 aa11.67□□□□□ -0.54
RAB5B-208ENST00000550283 FRYLO94915 3013 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 USP34Q70CQ2 3546 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 TMCO5BA8MYB1 307 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 ATMINO43313 823 aaPredicted RBP11.66□□□□□ -0.54
RAB5B-208ENST00000550283 CACNG3O60359 315 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 HSF2BPO75031 334 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 KAT7O95251 611 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 CAVIN2O95810 425 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 MOCS2O96007 188 aaPredicted RBP11.66□□□□□ -0.54
RAB5B-208ENST00000550283 SP9P0CG40 484 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 FERP16591 822 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 HOXD9P28356 352 aaPredicted RBP11.66□□□□□ -0.54
RAB5B-208ENST00000550283 KIR2DL1P43626 348 aaPredicted RBP11.66□□□□□ -0.54
RAB5B-208ENST00000550283 PXNP49023 591 aaPredicted RBP11.66□□□□□ -0.54
RAB5B-208ENST00000550283 NUMBP49757 651 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 CENPCQ03188 943 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 CSTF1Q05048 431 aaKnown RBP11.66□□□□□ -0.54
RAB5B-208ENST00000550283 GAD2Q05329 585 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 GRSF1Q12849 480 aaKnown RBP eCLIP11.66□□□□□ -0.54
RAB5B-208ENST00000550283 GEN1Q17RS7 908 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 C2orf27AQ580R0 203 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 PIK3R6Q5UE93 754 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 TMEM215Q68D42 235 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 BNIPLQ7Z465 357 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 C14orf80Q86SX3 495 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 TADA2BQ86TJ2 420 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 CIR1Q86X95 450 aaPredicted RBP11.66□□□□□ -0.54
RAB5B-208ENST00000550283 ZNF677Q86XU0 584 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 CCDC33Q8N5R6 958 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 RPLP0P6Q8NHW5 317 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 USP33Q8TEY7 942 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 NT5C3BQ969T7 300 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 MSANTD3Q96H12 275 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 CFAP57Q96MR6 1250 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 PNKPQ96T60 521 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 TRIM7Q9C029 511 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 ARHGEF4Q9NR80 690 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 DNAJC17Q9NVM6 304 aaKnown RBP11.66□□□□□ -0.54
RAB5B-208ENST00000550283 ASNSD1Q9NWL6 643 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 FBXO10Q9UK96 956 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 TLR6Q9Y2C9 796 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 DAAM1Q9Y4D1 1078 aa11.66□□□□□ -0.54
RAB5B-208ENST00000550283 A0A0A0MRY4 1105 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 KCNU1A8MYU2 1149 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 CAPN9O14815 690 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 SART1O43290 800 aaKnown RBP11.65□□□□□ -0.54
RAB5B-208ENST00000550283 ACSL4O60488 711 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 ADAM23O75077 832 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 ADCY5O95622 1261 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 GLI1P08151 1106 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 DRD1P21728 446 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 CASP14P31944 242 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 PRKCIP41743 596 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 MATKP42679 507 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 RPS24P62847 133 aaKnown RBP11.65□□□□□ -0.54
RAB5B-208ENST00000550283 OGDHQ02218 1023 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 RING1Q06587 406 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 NR1H3Q13133 447 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 NME3Q13232 169 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 SRSF5Q13243 272 aaKnown RBP11.65□□□□□ -0.54
RAB5B-208ENST00000550283 ASIC2Q16515 512 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 C15orf59Q2T9L4 293 aaPredicted RBP11.65□□□□□ -0.54
RAB5B-208ENST00000550283 FIGNQ5HY92 759 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 EFHC1Q5JVL4 640 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 DGKKQ5KSL6 1271 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 SFMBT2Q5VUG0 894 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 EGFLAMQ63HQ2 1017 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 RAP1GAP2Q684P5 730 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 RNF43Q68DV7 783 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 PHF13Q86YI8 300 aaPredicted RBP11.65□□□□□ -0.54
RAB5B-208ENST00000550283 CFAP52Q8N1V2 620 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 CPXM2Q8N436 756 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 IPO4Q8TEX9 1081 aaKnown RBP11.65□□□□□ -0.54
RAB5B-208ENST00000550283 SORCS1Q8WY21 1168 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 LMLNQ96KR4 655 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 PRMT1Q99873 361 aaKnown RBP11.65□□□□□ -0.54
RAB5B-208ENST00000550283 DCLK3Q9C098 648 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 SYNCQ9H7C4 482 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 FAM204AQ9H8W3 233 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 SEPT11Q9NVA2 429 aaKnown RBP11.65□□□□□ -0.54
RAB5B-208ENST00000550283 DDIT4Q9NX09 232 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 MYO6Q9UM54 1294 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 CAPN11Q9UMQ6 739 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 CEP83Q9Y592 693 aa11.65□□□□□ -0.54
RAB5B-208ENST00000550283 WASH3PC4AMC7 463 aa11.64□□□□□ -0.55
RAB5B-208ENST00000550283 M0QYT0 321 aa11.64□□□□□ -0.55
RAB5B-208ENST00000550283 SGK1O00141 431 aa11.64□□□□□ -0.55
RAB5B-208ENST00000550283 RRM1P23921 792 aa11.64□□□□□ -0.55
RAB5B-208ENST00000550283 NOS2P35228 1153 aa11.64□□□□□ -0.55
RAB5B-208ENST00000550283 RFC1P35251 1148 aaPredicted RBP11.64□□□□□ -0.55
RAB5B-208ENST00000550283 TIE1P35590 1138 aa11.64□□□□□ -0.55
RAB5B-208ENST00000550283 WASP42768 502 aa11.64□□□□□ -0.55
RAB5B-208ENST00000550283 HARS2P49590 506 aaKnown RBP11.64□□□□□ -0.55
RAB5B-208ENST00000550283 SULT1E1P49888 294 aa11.64□□□□□ -0.55
RAB5B-208ENST00000550283 RPL7AP62424 266 aaKnown RBP11.64□□□□□ -0.55
RAB5B-208ENST00000550283 TPM4P67936 248 aa11.64□□□□□ -0.55
RAB5B-208ENST00000550283 LRRC32Q14392 662 aa11.64□□□□□ -0.55
RAB5B-208ENST00000550283 CCDC14Q49A88 953 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms