RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 FAM149B1Q96BN6 582 aa17.02■□□□□ 0.32
VPS29-207ENST00000549970 TMA16Q96EY4 203 aaKnown RBP17.02■□□□□ 0.32
VPS29-207ENST00000549970 MRGPRX1Q96LB2 322 aa17.02■□□□□ 0.32
VPS29-207ENST00000549970 SLC2A11Q9BYW1 496 aa17.02■□□□□ 0.32
VPS29-207ENST00000549970 ACP6Q9NPH0 428 aa17.02■□□□□ 0.32
VPS29-207ENST00000549970 CD93Q9NPY3 652 aa17.02■□□□□ 0.32
VPS29-207ENST00000549970 TMEM74BQ9NUR3 256 aa17.02■□□□□ 0.32
VPS29-207ENST00000549970 ELOVL2Q9NXB9 296 aa17.02■□□□□ 0.32
VPS29-207ENST00000549970 STOML2Q9UJZ1 356 aa17.02■□□□□ 0.32
VPS29-207ENST00000549970 C4orf47A7E2U8 309 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 TM4SF5O14894 197 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 NPC1O15118 1278 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 THAP12O43422 761 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 LATS1O95835 1130 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 ADRB1P08588 477 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 ITPKAP23677 461 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 GNA15P30679 374 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 USP8P40818 1118 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 PI4KAP42356 2102 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 MTIF2P46199 727 aaKnown RBP17.01■□□□□ 0.31
VPS29-207ENST00000549970 SGSHP51688 502 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 TBX4P57082 545 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 ZNF445P59923 1031 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 IRX4P78413 519 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 APBA1Q02410 837 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 ARID5AQ03989 594 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 ZNF234Q14588 700 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 TPD52L1Q16890 204 aaPredicted RBP17.01■□□□□ 0.31
VPS29-207ENST00000549970 ARHGAP44Q17R89 818 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 FUT11Q495W5 492 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 TRIM61Q5EBN2 209 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 SPDYCQ5MJ68 293 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 ADGRF1Q5T601 910 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 TMEM215Q68D42 235 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 GBP6Q6ZN66 633 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 ENOSF1Q7L5Y1 443 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 SYT12Q8IV01 421 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 SCUBE3Q8IX30 993 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 MLKLQ8NB16 471 aa17.01■□□□□ 0.31
VPS29-207ENST00000549970 GOLGA6L7A0A1B0GV03 622 aa17■□□□□ 0.31
VPS29-207ENST00000549970 MED7O43513 233 aa17■□□□□ 0.31
VPS29-207ENST00000549970 SYNCRIPO60506 623 aaKnown RBP17■□□□□ 0.31
VPS29-207ENST00000549970 IGLV3-27P01718 113 aa17■□□□□ 0.31
VPS29-207ENST00000549970 HLA-FP30511 346 aa17■□□□□ 0.31
VPS29-207ENST00000549970 ACADSBP45954 432 aa17■□□□□ 0.31
VPS29-207ENST00000549970 RPL34P49207 117 aaKnown RBP17■□□□□ 0.31
VPS29-207ENST00000549970 EIF4HQ15056 248 aaKnown RBP17■□□□□ 0.31
VPS29-207ENST00000549970 EXOC3L4Q17RC7 722 aa17■□□□□ 0.31
VPS29-207ENST00000549970 NUGGCQ68CJ6 796 aa17■□□□□ 0.31
VPS29-207ENST00000549970 RFWD3Q6PCD5 774 aa17■□□□□ 0.31
VPS29-207ENST00000549970 IRF2BP1Q8IU81 584 aa17■□□□□ 0.31
VPS29-207ENST00000549970 UNC45BQ8IWX7 931 aa17■□□□□ 0.31
VPS29-207ENST00000549970 DQX1Q8TE96 717 aaKnown RBP17■□□□□ 0.31
VPS29-207ENST00000549970 ZNF606Q8WXB4 792 aa17■□□□□ 0.31
VPS29-207ENST00000549970 LSM14BQ9BX40 385 aaKnown RBP17■□□□□ 0.31
VPS29-207ENST00000549970 CLSTN2Q9H4D0 955 aa17■□□□□ 0.31
VPS29-207ENST00000549970 TMEM9BQ9NQ34 198 aa17■□□□□ 0.31
VPS29-207ENST00000549970 APEX2Q9UBZ4 518 aa17■□□□□ 0.31
VPS29-207ENST00000549970 EVLQ9UI08 416 aaPredicted RBP17■□□□□ 0.31
VPS29-207ENST00000549970 NAALADL1Q9UQQ1 740 aa17■□□□□ 0.31
VPS29-207ENST00000549970 BECN2A8MW95 431 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 E5RJQ4 531 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 SART1O43290 800 aaKnown RBP16.99■□□□□ 0.31
VPS29-207ENST00000549970 ACSL4O60488 711 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 TBL1XO60907 577 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 FYNP06241 537 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 PRKCHP24723 683 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 SLC6A4P31645 630 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 SLC11A2P49281 568 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 RING1Q06587 406 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 ZNF33AQ06730 810 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 ENPP2Q13822 863 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 DAB2IPQ5VWQ8 1189 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 SERPINA13PQ6UXR4 307 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 CHST9Q7L1S5 443 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 CACUL1Q86Y37 369 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 ADAM32Q8TC27 787 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 CYB5D2Q8WUJ1 264 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 FAM81BQ96LP2 452 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 SERPINB11Q96P15 392 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 NUSAP1Q9BXS6 441 aaKnown RBP16.99■□□□□ 0.31
VPS29-207ENST00000549970 MKRN2Q9H000 416 aaKnown RBP16.99■□□□□ 0.31
VPS29-207ENST00000549970 PRDM16Q9HAZ2 1276 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 ABCB8Q9NUT2 735 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 CYTH4Q9UIA0 394 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 PILRBQ9UKJ0 227 aa16.99■□□□□ 0.31
VPS29-207ENST00000549970 CKAP5Q14008 2032 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 CAPN9O14815 690 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 PAPSS1O43252 624 aaPredicted RBP16.98■□□□□ 0.31
VPS29-207ENST00000549970 TIMM44O43615 452 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 NDUFS2O75306 463 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 CFIP05156 583 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 EPHX1P07099 455 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 HLA-EP13747 358 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 PON1P27169 355 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 DPP6P42658 865 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 E2F5Q15329 346 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 MEA1Q16626 185 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 DPCR1Q3MIW9 517 aa16.98■□□□□ 0.31
VPS29-207ENST00000549970 FAM133BQ5BKY9 247 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms