RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 PEAR1Q5VY43 1037 aaPredicted RBP20.35■□□□□ 0.85
ATF1-202ENST00000549612 LYSMD4Q5XG99 296 aa20.35■□□□□ 0.85
ATF1-202ENST00000549612 NUGGCQ68CJ6 796 aa20.35■□□□□ 0.85
ATF1-202ENST00000549612 DENND1BQ6P3S1 775 aa20.35■□□□□ 0.85
ATF1-202ENST00000549612 SYT12Q8IV01 421 aa20.35■□□□□ 0.85
ATF1-202ENST00000549612 MRGPRX1Q96LB2 322 aa20.35■□□□□ 0.85
ATF1-202ENST00000549612 CRACR2AQ9BSW2 395 aa20.35■□□□□ 0.85
ATF1-202ENST00000549612 IRX2Q9BZI1 471 aaPredicted RBP20.35■□□□□ 0.85
ATF1-202ENST00000549612 CLSTN2Q9H4D0 955 aa20.35■□□□□ 0.85
ATF1-202ENST00000549612 MED7O43513 233 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 TIMM44O43615 452 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 TSPAN3O60637 253 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 FYNP06241 537 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 HOXD12P35452 270 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 IL12RB1P42701 662 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 ACADSBP45954 432 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 RPL6Q02878 288 aaKnown RBP20.34■□□□□ 0.85
ATF1-202ENST00000549612 FUT11Q495W5 492 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 TMEM215Q68D42 235 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 GBP6Q6ZN66 633 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 BEND5Q7L4P6 421 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 ARMCX6Q7L4S7 300 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 UNC45BQ8IWX7 931 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 ZNF606Q8WXB4 792 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 AZIN2Q96A70 460 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 ERLEC1Q96DZ1 483 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 TMA16Q96EY4 203 aaKnown RBP20.34■□□□□ 0.85
ATF1-202ENST00000549612 LSM14BQ9BX40 385 aaKnown RBP20.34■□□□□ 0.85
ATF1-202ENST00000549612 SLC4A5Q9BY07 1137 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 MIS12Q9H081 205 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 APEX2Q9UBZ4 518 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 PILRBQ9UKJ0 227 aa20.34■□□□□ 0.85
ATF1-202ENST00000549612 GON4LQ3T8J9 2241 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 TNRC6BQ9UPQ9 1833 aaKnown RBP20.33■□□□□ 0.85
ATF1-202ENST00000549612 BECN2A8MW95 431 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 LETM1O95202 739 aaPredicted RBP20.33■□□□□ 0.85
ATF1-202ENST00000549612 NCAM1P13591 858 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 SLC9A1P19634 815 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 TBX4P57082 545 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 NNTQ13423 1086 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 ZNF234Q14588 700 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 MPP7Q5T2T1 576 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 SMYD5Q6GMV2 418 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 GJB7Q6PEY0 223 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 METTL3Q86U44 580 aaKnown RBP20.33■□□□□ 0.85
ATF1-202ENST00000549612 SCUBE3Q8IX30 993 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.33■□□□□ 0.85
ATF1-202ENST00000549612 DQX1Q8TE96 717 aaKnown RBP20.33■□□□□ 0.85
ATF1-202ENST00000549612 CIPCQ9C0C6 399 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 SLC6A17Q9H1V8 727 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 ST7Q9NRC1 585 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 TMEM74BQ9NUR3 256 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 CYP8B1Q9UNU6 501 aa20.33■□□□□ 0.85
ATF1-202ENST00000549612 IRAK2O43187 625 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 ITPKAP23677 461 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 HLA-FP30511 346 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 GNA15P30679 374 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 SLC11A2P49281 568 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 SGSHP51688 502 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 IRX4P78413 519 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 APBA1Q02410 837 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 EXOC3L4Q17RC7 722 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 FAM133BQ5BKY9 247 aaKnown RBP20.32■□□□□ 0.84
ATF1-202ENST00000549612 TRIM61Q5EBN2 209 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 PIK3R6Q5UE93 754 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 KIAA0907Q7Z7F0 614 aaPredicted RBP20.32■□□□□ 0.84
ATF1-202ENST00000549612 TMEM110Q86TL2 294 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 CREBRFQ8IUR6 639 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 WFIKKN2Q8TEU8 576 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 SORCS1Q8WY21 1168 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 SHC3Q92529 594 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 FCRL2Q96LA5 508 aaPredicted RBP20.32■□□□□ 0.84
ATF1-202ENST00000549612 SERPINB11Q96P15 392 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 TRIM62Q9BVG3 475 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 THAP9Q9H5L6 903 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 ACP6Q9NPH0 428 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 CYTH4Q9UIA0 394 aa20.32■□□□□ 0.84
ATF1-202ENST00000549612 TPRP12270 2363 aaKnown RBP20.32■□□□□ 0.84
ATF1-202ENST00000549612 C4orf47A7E2U8 309 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 PAPSS1O43252 624 aaPredicted RBP20.31■□□□□ 0.84
ATF1-202ENST00000549612 THAP12O43422 761 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 ACSL4O60488 711 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 PON1P27169 355 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 SLC6A4P31645 630 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 MTIF2P46199 727 aaKnown RBP20.31■□□□□ 0.84
ATF1-202ENST00000549612 ZNF33AQ06730 810 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 LMAN2Q12907 356 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 RFWD3Q6PCD5 774 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 SLC23A3Q6PIS1 610 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 KIAA1324Q6UXG2 1013 aaKnown RBP20.31■□□□□ 0.84
ATF1-202ENST00000549612 FAM149B1Q96BN6 582 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 SLC39A13Q96H72 371 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 MKRN2Q9H000 416 aaKnown RBP20.31■□□□□ 0.84
ATF1-202ENST00000549612 PRDM16Q9HAZ2 1276 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 CD93Q9NPY3 652 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 TMEM9BQ9NQ34 198 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 USP36Q9P275 1121 aaKnown RBP20.31■□□□□ 0.84
ATF1-202ENST00000549612 NAALADL1Q9UQQ1 740 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 TLR6Q9Y2C9 796 aa20.31■□□□□ 0.84
ATF1-202ENST00000549612 ACACBO00763 2458 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms