RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 DRD4P21917 467 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 CCR1P32246 355 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 PTPN7P35236 360 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 SERPINB8P50452 374 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 TUBP50607 506 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 COPAP53621 1224 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 CSHL1Q14406 222 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 TAF5Q15542 800 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 DEFB115Q30KQ5 88 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 SLC45A4Q5BKX6 768 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 OR52K1Q8NGK4 314 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 RFWD2Q8NHY2 731 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 WNT8BQ93098 351 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 TIMM44O43615 452 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 RHOBTB1O94844 696 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 VNN1O95497 513 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 STMN1P16949 149 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 FAM83EQ2M2I3 478 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 TEX9Q8N6V9 391 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 DNAJC9Q8WXX5 260 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 SCAMP3O14828 347 aaKnown RBP16.72■□□□□ 0.27
CUX1-213ENST00000549414 ANP32DO95626 131 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 SPDYCQ5MJ68 293 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 TSHZ1Q6ZSZ6 1077 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 UNC93AQ86WB7 457 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 ANKRD52Q8NB46 1076 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 YME1L1Q96TA2 773 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 GPR63Q9BZJ6 419 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 MYLK2Q9H1R3 596 aa16.72■□□□□ 0.27
CUX1-213ENST00000549414 DMAP1Q9NPF5 467 aaPredicted RBP16.72■□□□□ 0.27
CUX1-213ENST00000549414 FCHO1O14526 889 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 ANGPT2O15123 496 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 ZNF189O75820 626 aaPredicted RBP16.71■□□□□ 0.27
CUX1-213ENST00000549414 ALDH1A1P00352 501 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 LBRQ14739 615 aaKnown RBP16.71■□□□□ 0.27
CUX1-213ENST00000549414 DCAF12L1Q5VU92 463 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 SLC39A4Q6P5W5 647 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.71■□□□□ 0.271e-12■■■□□ 16.9
CUX1-213ENST00000549414 CCDC138Q96M89 665 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 APBA2Q99767 749 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 ZCWPW1Q9H0M4 648 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 NSMCE4AQ9NXX6 385 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 OR12D3Q9UGF7 316 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 COQ4Q9Y3A0 265 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 LAMB4A4D0S4 1761 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 NOS2P35228 1153 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 NME5P56597 212 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 SLC39A12Q504Y0 691 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 FAM171A1Q5VUB5 890 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 POLNQ7Z5Q5 900 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 PRCCQ92733 491 aaPredicted RBP16.71■□□□□ 0.27
CUX1-213ENST00000549414 MRPL1Q9BYD6 325 aaKnown RBP16.71■□□□□ 0.27
CUX1-213ENST00000549414 C12orf65Q9H3J6 166 aaKnown RBP16.71■□□□□ 0.27
CUX1-213ENST00000549414 LRRC4CQ9HCJ2 640 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 OLA1Q9NTK5 396 aaKnown RBP16.71■□□□□ 0.27
CUX1-213ENST00000549414 ACOT9Q9Y305 439 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 MYH8P13535 1937 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 NCF1BA6NI72 391 aaPredicted RBP16.71■□□□□ 0.27
CUX1-213ENST00000549414 NCF1CA8MVU1 366 aaPredicted RBP16.71■□□□□ 0.27
CUX1-213ENST00000549414 ARIH2O95376 493 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 SLC2A3P11169 496 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 NCF1P14598 390 aaPredicted RBP16.71■□□□□ 0.27
CUX1-213ENST00000549414 ICAM3P32942 547 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 GP5P40197 560 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 GALNT4Q8N4A0 578 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 PPP2R3CQ969Q6 453 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 TSC22D3Q99576 134 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 SMPD4Q9NXE4 827 aa16.71■□□□□ 0.27
CUX1-213ENST00000549414 PRRC2BQ5JSZ5 2229 aaKnown RBP16.71■□□□□ 0.27
CUX1-213ENST00000549414 E2F6O75461 281 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 CREB1P16220 341 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 AXLP30530 894 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 CAPRIN1Q14444 709 aaKnown RBP16.7■□□□□ 0.26
CUX1-213ENST00000549414 SGO1Q5FBB7 561 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 CAPRIN2Q6IMN6 1127 aaKnown RBP16.7■□□□□ 0.26
CUX1-213ENST00000549414 KCNK16Q96T55 309 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 SH3GL2Q99962 352 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 CINPQ9BW66 212 aaPredicted RBP16.7■□□□□ 0.26
CUX1-213ENST00000549414 COLEC11Q9BWP8 271 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 EIF2AQ9BY44 585 aaKnown RBP16.7■□□□□ 0.26
CUX1-213ENST00000549414 PDZD7Q9H5P4 517 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 TRPV2Q9Y5S1 764 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 PHGDHO43175 533 aaKnown RBP16.7■□□□□ 0.26
CUX1-213ENST00000549414 ALDH1A3P47895 512 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 NR2C2P49116 596 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 PLIN5Q00G26 463 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 APOL5Q9BWW9 433 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 CD274Q9NZQ7 290 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 SLC4A7Q9Y6M7 1214 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 A0A096LPK6 155 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 STX7O15400 261 aaKnown RBP16.7■□□□□ 0.26
CUX1-213ENST00000549414 CILPO75339 1184 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 GRM5P41594 1212 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 ESRRGP62508 458 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 RAD51Q06609 339 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 PDE1CQ14123 709 aaPredicted RBP16.7■□□□□ 0.26
CUX1-213ENST00000549414 NFE2Q16621 373 aaPredicted RBP16.7■□□□□ 0.26
CUX1-213ENST00000549414 DUSP28Q4G0W2 176 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 SDHAF4Q5VUM1 108 aa16.7■□□□□ 0.26
CUX1-213ENST00000549414 XYLT1Q86Y38 959 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms