RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 TRIM51Q9BSJ1 452 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ARMC7Q9H6L4 198 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ADAM21Q9UKJ8 722 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ASB3Q9Y575 518 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 SQORQ9Y6N5 450 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ASTN1O14525 1302 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 CARSP49589 748 aaKnown RBP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 RAP1GDS1P52306 607 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 PSMD5Q16401 504 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ARMC12Q5T9G4 340 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 C1orf146Q5VVC0 180 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 SLC47A2Q86VL8 602 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 MON1AQ86VX9 555 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 STK32AQ8WU08 396 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ZNF112Q9UJU3 913 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 BLOC1S6Q9UL45 172 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 VANGL2Q9ULK5 521 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 RNF112Q9ULX5 631 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 ST3GAL5Q9UNP4 418 aa9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 TNPO3Q9Y5L0 923 aaKnown RBP9.5□□□□□ -0.89
PPFIA2-216ENST00000549396 GRIN2DO15399 1336 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 FAM170AA1A519 330 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 C16orf96A6NNT2 1141 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 CD151P48509 253 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 SKOR1P84550 965 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 BEND6Q5SZJ8 279 aaPredicted RBP9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 LVRNQ6Q4G3 990 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 MIB1Q86YT6 1006 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 B3GALNT2Q8NCR0 500 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 DTX3LQ8TDB6 740 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 SLC2A14Q8TDB8 520 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 L3MBTL3Q96JM7 780 aaPredicted RBP9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 NEUROG2Q9H2A3 272 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 COPS7BQ9H9Q2 264 aaPredicted RBP9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 ACOT9Q9Y305 439 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 KDM3BQ7LBC6 1761 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 ASTN2O75129 1339 aaPredicted RBP9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 FAM47E-STBD1D6RA91 191 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 RAD51BO15315 384 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 MAP2K2P36507 400 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 SCNN1AP37088 669 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 GP5P40197 560 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 HALP42357 657 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 TUBP50607 506 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 MPP3Q13368 585 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 FAM133BQ5BKY9 247 aaKnown RBP9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 GJB7Q6PEY0 223 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 FNIP1Q8TF40 1166 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 SUSD6Q92537 303 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 MRPL48Q96GC5 212 aaKnown RBP9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 TBL1YQ9BQ87 522 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 NFKBIZQ9BYH8 718 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 KCNF1Q9H3M0 494 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 MANSC1Q9H8J5 431 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 SIK3Q9Y2K2 1263 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 PCDHGC5Q9Y5F6 944 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 FAM95CA0A1B0GW59 222 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 CXCR2P25025 360 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 CTNNB1P35222 781 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 CLK2P49760 499 aaKnown RBP9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 VSNL1P62760 191 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 CPA6Q8N4T0 437 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 MAGEB18Q96M61 343 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 SAMD11Q96NU1 681 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 GAD1Q99259 594 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 TTPALQ9BTX7 342 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 FICDQ9BVA6 458 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 DUSP16Q9BY84 665 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 ZYG11BQ9C0D3 744 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 IL22Q9GZX6 179 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 RBM22Q9NW64 420 aaKnown RBP eCLIP9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 FNIP2Q9P278 1114 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 ARHGAP20Q9P2F6 1191 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 TBC1D30Q9Y2I9 924 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 A0A0B4J269 797 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 KRT6AP02538 564 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 KRT6BP04259 564 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 ITGB5P18084 799 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 DDX6P26196 483 aaKnown RBP eCLIP9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 OR1E1P30953 314 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 KRT6CP48668 564 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 ITIH4Q14624 930 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 LONRF1Q17RB8 773 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 CXCL17Q6UXB2 119 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 KDM7AQ6ZMT4 941 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 LRRC8DQ7L1W4 858 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 TRMT11Q7Z4G4 463 aaKnown RBP9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 NPAS4Q8IUM7 802 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 DEFB106AQ8N104 65 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 COLGALT1Q8NBJ5 622 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 ABCF3Q9NUQ8 709 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 NCKIPSDQ9NZQ3 722 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 SOX13Q9UN79 622 aa9.49□□□□□ -0.89
PPFIA2-216ENST00000549396 KATNA1O75449 491 aa9.48□□□□□ -0.89
PPFIA2-216ENST00000549396 MTA2O94776 668 aa9.48□□□□□ -0.89
PPFIA2-216ENST00000549396 HIPK3Q9H422 1215 aa9.48□□□□□ -0.89
PPFIA2-216ENST00000549396 DHX33Q9H6R0 707 aaKnown RBP9.48□□□□□ -0.89
PPFIA2-216ENST00000549396 POLG2Q9UHN1 485 aa9.48□□□□□ -0.89
PPFIA2-216ENST00000549396 SNTNA6NMZ2 147 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms