RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TSPAN3O60637 253 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 CYBBP04839 570 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 ADRB1P08588 477 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 PAEPP09466 180 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 ITPKAP23677 461 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 TBXAS1P24557 533 aaPredicted RBP7.01□□□□□ -1.29
SCAF11-211ENST00000547950 PPP1R2P41236 205 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 HARS2P49590 506 aaKnown RBP7.01□□□□□ -1.29
SCAF11-211ENST00000547950 BCAT1P54687 386 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 MFAP3P55082 362 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 RPL6Q02878 288 aaKnown RBP7.01□□□□□ -1.29
SCAF11-211ENST00000547950 BST2Q10589 180 aaKnown RBP7.01□□□□□ -1.29
SCAF11-211ENST00000547950 MORC3Q14149 939 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 GEN1Q17RS7 908 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 UAP1L1Q3KQV9 507 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 TRIM61Q5EBN2 209 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 FYB2Q5VWT5 728 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 PM20D1Q6GTS8 502 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 TTI2Q6NXR4 508 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 FMNL3Q8IVF7 1028 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 ELOA2Q8IYF1 753 aaPredicted RBP7.01□□□□□ -1.29
SCAF11-211ENST00000547950 EHBP1Q8NDI1 1231 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 NT5C1BQ96P26 610 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 GABRG3Q99928 467 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 LSM14BQ9BX40 385 aaKnown RBP7.01□□□□□ -1.29
SCAF11-211ENST00000547950 SRRTQ9BXP5 876 aaKnown RBP7.01□□□□□ -1.29
SCAF11-211ENST00000547950 MIS12Q9H081 205 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 SLC6A17Q9H1V8 727 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 TMEM74BQ9NUR3 256 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 CALCOCO1Q9P1Z2 691 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 FBXO10Q9UK96 956 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 CLEC4EQ9ULY5 219 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 CYP8B1Q9UNU6 501 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 STON1Q9Y6Q2 735 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 CEP250Q9BV73 2442 aa7.01□□□□□ -1.29
SCAF11-211ENST00000547950 ATXN2Q99700 1313 aaKnown RBP7.01□□□□□ -1.29
SCAF11-211ENST00000547950 CACNA1AO00555 2505 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 NCOR2Q9Y618 2525 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 BICDL2A1A5D9 508 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 M0QYV0 167 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 CDX4O14627 284 aaPredicted RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 AP5Z1O43299 807 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 MSI1O43347 362 aaKnown RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 SYNCRIPO60506 623 aaKnown RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 NDUFS2O75306 463 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 DXOO77932 396 aaKnown RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 KCNK5O95279 499 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 GNA14O95837 355 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 AVPP01185 164 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 PENKP01210 267 aaPredicted RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 CFIP05156 583 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 SETSIPP0DME0 302 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 NDUFV2P19404 249 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 BRD2P25440 801 aaKnown RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 MAPK8P45983 427 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 ARID5AQ03989 594 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 ZNF33AQ06730 810 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 KCNH2Q12809 1159 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 PAK1Q13153 545 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 STARD3Q14849 445 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 TRIP4Q15650 581 aaPredicted RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 CNGA2Q16280 664 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 CAMK4Q16566 473 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 DAB2IPQ5VWQ8 1189 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 LYSMD4Q5XG99 296 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 PSAPL1Q6NUJ1 521 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 PMF1Q6P1K2 205 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 LCLAT1Q6UWP7 414 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 KIAA1324Q6UXG2 1013 aaKnown RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 SLC36A4Q6YBV0 504 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 BHLHA9Q7RTU4 235 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 SYT12Q8IV01 421 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 ARHGEF19Q8IW93 802 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 UBR7Q8N806 425 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 TRIML1Q8N9V2 468 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 RBBP8NLQ8NC74 664 aaPredicted RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 SLC35F5Q8WV83 523 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 UCMAQ8WVF2 138 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 SORCS1Q8WY21 1168 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 KCTD13Q8WZ19 329 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 GOLGA1Q92805 767 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 PLD4Q96BZ4 506 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 TMA16Q96EY4 203 aaKnown RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 MRGPRX2Q96LB1 330 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 MRGPRX1Q96LB2 322 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 ZSWIM1Q9BR11 485 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 NUSAP1Q9BXS6 441 aaKnown RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 CIPCQ9C0C6 399 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 UBE2TQ9NPD8 197 aaPredicted RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 TMEM9BQ9NQ34 198 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 FSCN3Q9NQT6 498 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 CNGB3Q9NQW8 809 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 ABCC13Q9NSE7 274 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 OLA1Q9NTK5 396 aaKnown RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 GMPR2Q9P2T1 348 aaKnown RBP7□□□□□ -1.29
SCAF11-211ENST00000547950 SLC27A6Q9Y2P4 619 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7□□□□□ -1.29
SCAF11-211ENST00000547950 DCHS1Q96JQ0 3298 aa7□□□□□ -1.29
SCAF11-211ENST00000547950 IGHV1OR15-9A0A0B4J2B8 117 aa6.99□□□□□ -1.29
SCAF11-211ENST00000547950 GOLGA6L7A0A1B0GV03 622 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms