RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 FAM102AQ5T9C2 384 aaPredicted RBP19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 EMC10Q5UCC4 262 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 MMS22LQ6ZRQ5 1243 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 IRF2BP2Q7Z5L9 587 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 SLC30A5Q8TAD4 765 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 DDI1Q8WTU0 396 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 AGPAT1Q99943 283 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 FAM126AQ9BYI3 521 aaPredicted RBP19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 TTYH3Q9C0H2 523 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 FAM204AQ9H8W3 233 aa19.47■□□□□ 0.71
PRPF40B-206ENST00000547764 MMP8P22894 467 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 SLC6A4P31645 630 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 NOS2P35228 1153 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 PBX1P40424 430 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 MATKP42679 507 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 KIR2DL1P43626 348 aaPredicted RBP19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 ZNF445P59923 1031 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 MRPS21P82921 87 aaKnown RBP19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 C10orf76Q5T2E6 689 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 NADSYN1Q6IA69 706 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 RFWD3Q6PCD5 774 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 NUDT18Q6ZVK8 323 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 SYT13Q7L8C5 426 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 ACDQ96AP0 544 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 TMA16Q96EY4 203 aaKnown RBP19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 DDIT4Q9NX09 232 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 ZSCAN32Q9NX65 697 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 IFNKQ9P0W0 207 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 CLEC4EQ9ULY5 219 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 SLC8A2Q9UPR5 921 aa19.46■□□□□ 0.71
PRPF40B-206ENST00000547764 SYNJ2BP-COX16A0A087WUM0 186 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 PROB1E7EW31 1015 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 GOLGA8SH3BPF8 625 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 MOCS2O96007 188 aaPredicted RBP19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 APOEP02649 317 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 GBP1P32455 592 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 TIE1P35590 1138 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 NRLP54845 237 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 CENPCQ03188 943 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 DMWDQ09019 674 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 CLEC16AQ2KHT3 1053 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 FIGNQ5HY92 759 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 PIK3R6Q5UE93 754 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 ZC3H14Q6PJT7 736 aaKnown RBP19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 CCDC33Q8N5R6 958 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 ZBTB44Q8NCP5 570 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 C11orf70Q9BRQ4 267 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 EDEM3Q9BZQ6 932 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 ZDHHC4Q9NPG8 344 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 SEPT11Q9NVA2 429 aaKnown RBP19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 COX16Q9P0S2 106 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 XPO7Q9UIA9 1087 aaKnown RBP19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 PCDHGA2Q9Y5H1 932 aa19.45■□□□□ 0.7
PRPF40B-206ENST00000547764 PRRT4C9JH25 899 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 HOXD9P28356 352 aaPredicted RBP19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 HOXA6P31267 233 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 NSFP46459 744 aaKnown RBP19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 SGSHP51688 502 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 NME3Q13232 169 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 DMC1Q14565 340 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 SFMBT2Q5VUG0 894 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 E4F1Q66K89 784 aaPredicted RBP19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 PHLDB2Q86SQ0 1253 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 ALLCQ8N6M5 410 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 IL17RCQ8NAC3 791 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 ATRIPQ8WXE1 791 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 NPY6RQ99463 290 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 DDX50Q9BQ39 737 aaKnown RBP19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 SYT11Q9BT88 431 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 NUP58Q9BVL2 599 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 ADAM33Q9BZ11 813 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 NUCKS1Q9H1E3 243 aaKnown RBP19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 RRN3Q9NYV6 651 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 AIPL1Q9NZN9 384 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 CALCOCO1Q9P1Z2 691 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 TMEM59LQ9UK28 342 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 HCN2Q9UL51 889 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 SLC27A6Q9Y2P4 619 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 STARD13Q9Y3M8 1113 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 MYO15AQ9UKN7 3530 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 VPS13AQ96RL7 3174 aa19.44■□□□□ 0.7
PRPF40B-206ENST00000547764 FANCMQ8IYD8 2048 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 KCNU1A8MYU2 1149 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 M0QYT0 321 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 KLF8O95600 359 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 SLC2A3P11169 496 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 TFE3P19532 575 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 CCR1P32246 355 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 FLT3P36888 993 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 FNTBP49356 437 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 PTP4A2Q12974 167 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 ASIC2Q16515 512 aa19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 HSF5Q4G112 596 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 OTUD1Q5VV17 481 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 HEATR6Q6AI08 1181 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 PHF13Q86YI8 300 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 ZNF513Q8N8E2 541 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-206ENST00000547764 ATP6V0D2Q8N8Y2 350 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms