RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SEPT11Q9NVA2 429 aaKnown RBP12.3□□□□□ -0.44
RAB5C-204ENST00000547517 DDIT4Q9NX09 232 aa12.3□□□□□ -0.44
RAB5C-204ENST00000547517 COX16Q9P0S2 106 aa12.3□□□□□ -0.44
RAB5C-204ENST00000547517 STOML2Q9UJZ1 356 aa12.3□□□□□ -0.44
RAB5C-204ENST00000547517 ATG2BQ96BY7 2078 aa12.3□□□□□ -0.44
RAB5C-204ENST00000547517 FANCMQ8IYD8 2048 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 GOLGA6L7A0A1B0GV03 622 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 PRR23AA6NEV1 266 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 GOLGA8SH3BPF8 625 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 ACSL4O60488 711 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 CAVIN2O95810 425 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 IGLV3-25P01717 112 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 CHRM1P11229 460 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 CHRNB2P17787 502 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 HOXD9P28356 352 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 SLC6A4P31645 630 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 TNFRSF4P43489 277 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 KIR2DL1P43626 348 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 SGSHP51688 502 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 ZNF445P59923 1031 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 RNASE9P60153 205 aaKnown RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 MRPS21P82921 87 aaKnown RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 FANCCQ00597 558 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 MPPE1Q53F39 396 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 FAM133BQ5BKY9 247 aaKnown RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 ZC3H12AQ5D1E8 599 aaKnown RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 ADGRF1Q5T601 910 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 NADSYN1Q6IA69 706 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 RFWD3Q6PCD5 774 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 TRIM72Q6ZMU5 477 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 MMS22LQ6ZRQ5 1243 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 NUDT18Q6ZVK8 323 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 XYLT1Q86Y38 959 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 ZDHHC17Q8IUH5 632 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 ZNF513Q8N8E2 541 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 IL17RCQ8NAC3 791 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 TXNDC5Q8NBS9 432 aaKnown RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 C18orf8Q96DM3 657 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 SLC39A13Q96H72 371 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 PRICKLE1Q96MT3 831 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 NUCKS1Q9H1E3 243 aaKnown RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 XPO7Q9UIA9 1087 aaKnown RBP12.29□□□□□ -0.44
RAB5C-204ENST00000547517 CLEC4EQ9ULY5 219 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 MMP17Q9ULZ9 603 aa12.29□□□□□ -0.44
RAB5C-204ENST00000547517 A0A0A0MRY4 1105 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 A0A1W2PQC6 194 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 PRRT4C9JH25 899 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 SGK1O00141 431 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 LILRB5O75023 590 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 APBB3O95704 486 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 CYP1A1P04798 512 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-204ENST00000547517 CISD3P0C7P0 127 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 FERP16591 822 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 GABRB2P47870 512 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 SULT1E1P49888 294 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 NME3Q13232 169 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 SRSF5Q13243 272 aaKnown RBP12.28□□□□□ -0.44
RAB5C-204ENST00000547517 NFKBIBQ15653 356 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 GEN1Q17RS7 908 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 EOGTQ5NDL2 527 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 EGFLAMQ63HQ2 1017 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 ANKS1BQ7Z6G8 1248 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 WDR5BQ86VZ2 330 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 LONP2Q86WA8 852 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 ZNF397Q8NF99 534 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-204ENST00000547517 TSTD1Q8NFU3 115 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 SLC30A5Q8TAD4 765 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 BAP1Q92560 729 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 RNF34Q969K3 372 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 TMA16Q96EY4 203 aaKnown RBP12.28□□□□□ -0.44
RAB5C-204ENST00000547517 PCDHB18PQ96TA0 734 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 DDX50Q9BQ39 737 aaKnown RBP12.28□□□□□ -0.44
RAB5C-204ENST00000547517 C11orf70Q9BRQ4 267 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 METTL5Q9NRN9 209 aaKnown RBP12.28□□□□□ -0.44
RAB5C-204ENST00000547517 USP34Q70CQ2 3546 aa12.28□□□□□ -0.44
RAB5C-204ENST00000547517 TYW5A2RUC4 315 aaKnown RBP12.27□□□□□ -0.45
RAB5C-204ENST00000547517 LRRC53A6NM62 1247 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 M0QYT0 321 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 GFRA2O00451 464 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 TBL1XO60907 577 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 ADAM23O75077 832 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 LMNAP02545 664 aaKnown RBP12.27□□□□□ -0.45
RAB5C-204ENST00000547517 TFE3P19532 575 aaPredicted RBP12.27□□□□□ -0.45
RAB5C-204ENST00000547517 HOXA6P31267 233 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 GBP1P32455 592 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 NOS2P35228 1153 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 SCNN1AP37088 669 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 MATKP42679 507 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 WASP42768 502 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 NSFP46459 744 aaKnown RBP12.27□□□□□ -0.45
RAB5C-204ENST00000547517 ASIC2Q16515 512 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 CRY1Q16526 586 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 CLEC16AQ2KHT3 1053 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 HSF5Q4G112 596 aaPredicted RBP12.27□□□□□ -0.45
RAB5C-204ENST00000547517 PIK3R6Q5UE93 754 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 OTUD1Q5VV17 481 aaPredicted RBP12.27□□□□□ -0.45
RAB5C-204ENST00000547517 RAP1GAP2Q684P5 730 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 ANO7Q6IWH7 933 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 PRR23BQ6ZRT6 265 aa12.27□□□□□ -0.45
RAB5C-204ENST00000547517 TRMT11Q7Z4G4 463 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms