RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 SLC2A11Q9BYW1 496 aa11.38□□□□□ -0.59
GCN1-202ENST00000547263 TMEM51Q9NW97 253 aa11.38□□□□□ -0.59
GCN1-202ENST00000547263 SPATA6Q9NWH7 488 aaPredicted RBP11.38□□□□□ -0.59
GCN1-202ENST00000547263 RRN3Q9NYV6 651 aa11.38□□□□□ -0.59
GCN1-202ENST00000547263 CALCOCO1Q9P1Z2 691 aa11.38□□□□□ -0.59
GCN1-202ENST00000547263 CKAP5Q14008 2032 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 LRRC53A6NM62 1247 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 TRIM24O15164 1050 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 ATG13O75143 517 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 SERPINC1P01008 464 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 HMBSP08397 361 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 SLC6A4P31645 630 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 CXCL12P48061 93 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 UBASH3AP57075 661 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 MTA1Q13330 715 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 ENPP2Q13822 863 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 PPP2R5DQ14738 602 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 CLEC16AQ2KHT3 1053 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 C5orf22Q49AR2 442 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 PREPLQ4J6C6 727 aaPredicted RBP11.37□□□□□ -0.59
GCN1-202ENST00000547263 DCAF6Q58WW2 860 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 PIK3R6Q5UE93 754 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 NAA35Q5VZE5 725 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 OR6B2Q6IFH4 312 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 MON1BQ7L1V2 547 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 CAMKK1Q8N5S9 505 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 TTC16Q8NEE8 873 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 SYN2Q92777 582 aaPredicted RBP11.37□□□□□ -0.59
GCN1-202ENST00000547263 PRICKLE1Q96MT3 831 aaPredicted RBP11.37□□□□□ -0.59
GCN1-202ENST00000547263 XPO6Q96QU8 1125 aaKnown RBP11.37□□□□□ -0.59
GCN1-202ENST00000547263 NUP58Q9BVL2 599 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 SEMA4AQ9H3S1 761 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 ARHGEF4Q9NR80 690 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.37□□□□□ -0.59
GCN1-202ENST00000547263 DEC1Q9P2X7 70 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 PCDHGA2Q9Y5H1 932 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 DOCK4Q8N1I0 1966 aa11.37□□□□□ -0.59
GCN1-202ENST00000547263 PRRT4C9JH25 899 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 NEDD8-MDP1E9PL57 170 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 GOLGA6L19H0YKK7 550 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 I6L893 689 aaPredicted RBP11.36□□□□□ -0.59
GCN1-202ENST00000547263 APODP05090 189 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 CCDC172P0C7W6 258 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 HNRNPLP14866 589 aaKnown RBP eCLIP11.36□□□□□ -0.59
GCN1-202ENST00000547263 FLT3P36888 993 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 CXCR3P49682 368 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 SGSHP51688 502 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 TPM4P67936 248 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 CDK17Q00537 523 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
GCN1-202ENST00000547263 ANO4Q32M45 955 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 SLC25A52Q3SY17 297 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 MPPE1Q53F39 396 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 PPP1R15BQ5SWA1 713 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 HGSNATQ68CP4 663 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 TPGS1Q6ZTW0 290 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 CACNA2D4Q7Z3S7 1137 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 RASSF3Q86WH2 238 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 IL17RCQ8NAC3 791 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 SLC30A5Q8TAD4 765 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 CPA5Q8WXQ8 436 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 ACDQ96AP0 544 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 MYEOVQ96EZ4 313 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 BTN2A3PQ96KV6 586 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 PHOX2BQ99453 314 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 AGPAT1Q99943 283 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 TSPY26PQ9H489 355 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 DNAJC17Q9NVM6 304 aaKnown RBP11.36□□□□□ -0.59
GCN1-202ENST00000547263 ZSCAN32Q9NX65 697 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 ARHGEF38Q9NXL2 777 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 CLEC4EQ9ULY5 219 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 MMP17Q9ULZ9 603 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 CAPN11Q9UMQ6 739 aa11.36□□□□□ -0.59
GCN1-202ENST00000547263 CAPN9O14815 690 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 ADAM23O75077 832 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 GYPCP04921 128 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 SLC2A3P11169 496 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 GZMAP12544 262 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 TFE3P19532 575 aaPredicted RBP11.35□□□□□ -0.59
GCN1-202ENST00000547263 HOXC13P31276 330 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 HOXD11P31277 338 aaPredicted RBP11.35□□□□□ -0.59
GCN1-202ENST00000547263 HNRNPH3P31942 346 aaKnown RBP11.35□□□□□ -0.59
GCN1-202ENST00000547263 SLC11A2P49281 568 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 DGKGP49619 791 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 ZC3H12AQ5D1E8 599 aaKnown RBP11.35□□□□□ -0.59
GCN1-202ENST00000547263 MS4A13Q5J8X5 152 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 BRMS1LQ5PSV4 323 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 TMEM215Q68D42 235 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 GRAMD4Q6IC98 578 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 MMS22LQ6ZRQ5 1243 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 WDR5BQ86VZ2 330 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 ZNF683Q8IZ20 524 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 NAT16Q8N8M0 369 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 MSANTD4Q8NCY6 345 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 C3orf20Q8ND61 904 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 RPLP0P6Q8NHW5 317 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 ADAM32Q8TC27 787 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 CENPIQ92674 756 aaPredicted RBP11.35□□□□□ -0.59
GCN1-202ENST00000547263 VCPIP1Q96JH7 1222 aa11.35□□□□□ -0.59
GCN1-202ENST00000547263 PCMTD1Q96MG8 357 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms