RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 F11P03951 625 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 H2AFZP0C0S5 128 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 USP17L7P0C7H9 530 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 MYBL1P10243 752 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 MAGEA1P43355 309 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 GABRB2P47870 512 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 GALCP54803 685 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 DAOAP59103 153 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 KRT83P78385 493 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 PTP4A2Q12974 167 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 SRSF5Q13243 272 aaKnown RBP12.61□□□□□ -0.39
HDAC7-226ENST00000547259 ELF2Q15723 593 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 ST3GAL2Q16842 350 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 FAM102AQ5T9C2 384 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-226ENST00000547259 DNAJC24Q6P3W2 148 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 TOGARAM2Q6ZUX3 1019 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 H2AFVQ71UI9 128 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 PHLDB2Q86SQ0 1253 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 KIAA1328Q86T90 577 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 ZDHHC17Q8IUH5 632 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 SCUBE3Q8IX30 993 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 CLEC4CQ8WTT0 213 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 CTNNBL1Q8WYA6 563 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-226ENST00000547259 GOLGA1Q92805 767 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 TRMT2BQ96GJ1 504 aaKnown RBP12.61□□□□□ -0.39
HDAC7-226ENST00000547259 VCPIP1Q96JH7 1222 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 SLITRK1Q96PX8 696 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 TTLL2Q9BWV7 592 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 PACSIN1Q9BY11 444 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 THAP2Q9H0W7 228 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 ARRDC1-AS1Q9H2J1 176 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 VPS45Q9NRW7 570 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 WDR35Q9P2L0 1181 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 MYO1AQ9UBC5 1043 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 CNOT8Q9UFF9 292 aaKnown RBP12.61□□□□□ -0.39
HDAC7-226ENST00000547259 ANGPTL2Q9UKU9 493 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 PCDHA13Q9Y5I0 950 aa12.61□□□□□ -0.39
HDAC7-226ENST00000547259 HELZP42694 1942 aaKnown RBP12.6□□□□□ -0.39
HDAC7-226ENST00000547259 USP24Q9UPU5 2620 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 TRAV19A0A0A6YYK7 116 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 ANKRD62A6NC57 917 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 SART1O43290 800 aaKnown RBP12.6□□□□□ -0.39
HDAC7-226ENST00000547259 HMGA1P17096 107 aaKnown RBP12.6□□□□□ -0.39
HDAC7-226ENST00000547259 PFKLP17858 780 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 RRM1P23921 792 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 GSCP56915 257 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-226ENST00000547259 SLC6A3Q01959 620 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 TAF10Q12962 218 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 OLFML1Q6UWY5 402 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 SYT13Q7L8C5 426 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 SCML4Q8N228 414 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 TXLNBQ8N3L3 684 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 C3orf20Q8ND61 904 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 PDZD8Q8NEN9 1154 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 IRGQQ8WZA9 623 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 NDRG1Q92597 394 aaKnown RBP12.6□□□□□ -0.39
HDAC7-226ENST00000547259 USP13Q92995 863 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-226ENST00000547259 ATP2A3Q93084 1043 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 FAM149B1Q96BN6 582 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 TRIM44Q96DX7 344 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-226ENST00000547259 MYRFLQ96LU7 910 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 P2RY13Q9BPV8 354 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 SELENOOQ9BVL4 669 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 EBF3Q9H4W6 596 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 METTL5Q9NRN9 209 aaKnown RBP12.6□□□□□ -0.39
HDAC7-226ENST00000547259 IL37Q9NZH6 218 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 GMIPQ9P107 970 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 SCML2Q9UQR0 700 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 REXO2Q9Y3B8 237 aaKnown RBP12.6□□□□□ -0.39
HDAC7-226ENST00000547259 USP3Q9Y6I4 520 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 SCINQ9Y6U3 715 aa12.6□□□□□ -0.39
HDAC7-226ENST00000547259 A0A1W2PQH9 124 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 FAM92AA1XBS5 289 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 APBB3O95704 486 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 CCDC175P0C221 793 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 TMEM253P0C7T8 217 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 IFNAR2P48551 515 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 VAV2P52735 878 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 YWHAGP61981 247 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC7-226ENST00000547259 EFHC1Q5JVL4 640 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 PM20D1Q6GTS8 502 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 FSTL4Q6MZW2 842 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 ARHGAP18Q8N392 663 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 KIAA1958Q8N8K9 716 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 OVCA2Q8WZ82 227 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 PIWIL1Q96J94 861 aaKnown RBP12.59□□□□□ -0.39
HDAC7-226ENST00000547259 HPS4Q9NQG7 708 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 TLR8Q9NR97 1041 aaKnown RBP12.59□□□□□ -0.39
HDAC7-226ENST00000547259 PARVAQ9NVD7 372 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 DUS2Q9NX74 493 aaKnown RBP12.59□□□□□ -0.39
HDAC7-226ENST00000547259 EBF1Q9UH73 591 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 INTUQ9ULD6 942 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 ADGRG1Q9Y653 693 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC7-226ENST00000547259 EML5Q05BV3 1969 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 LAMA1P25391 3075 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 FAM208BQ5VWN6 2430 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 NUP205Q92621 2012 aa12.59□□□□□ -0.39
HDAC7-226ENST00000547259 YJEFN3A6XGL0 299 aa12.58□□□□□ -0.4
HDAC7-226ENST00000547259 E7ENQ6 273 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms