RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ZNF341Q9BYN7 854 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 SLC2A11Q9BYW1 496 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 FAM96AQ9H5X1 160 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 DHX33Q9H6R0 707 aaKnown RBP11.02□□□□□ -0.64
NPAS3-205ENST00000547068 UGT1A7Q9HAW7 530 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 UGT1A10Q9HAW8 530 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 UGT1A8Q9HAW9 530 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 GPRC5CQ9NQ84 441 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 DNAJC28Q9NX36 388 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 TBX20Q9UMR3 447 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 EFR3BQ9Y2G0 817 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 SQORQ9Y6N5 450 aa11.02□□□□□ -0.64
NPAS3-205ENST00000547068 C3orf70A6NLC5 250 aaPredicted RBP11.02□□□□□ -0.65
NPAS3-205ENST00000547068 ALDH2P05091 517 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 ALDH3B2P48448 385 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 RARRES1P49788 294 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 EIF3EP60228 445 aaKnown RBP11.02□□□□□ -0.65
NPAS3-205ENST00000547068 RPL10AP62906 217 aaKnown RBP11.02□□□□□ -0.65
NPAS3-205ENST00000547068 PIGHQ14442 188 aaPredicted RBP11.02□□□□□ -0.65
NPAS3-205ENST00000547068 TGFBIQ15582 683 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 VWA5B1Q5TIE3 1220 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 MBLAC2Q68D91 279 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 SPOPLQ6IQ16 392 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 PPP1R2P3Q6NXS1 205 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 BBS12Q6ZW61 710 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 TRMT1LQ7Z2T5 733 aaKnown RBP11.02□□□□□ -0.65
NPAS3-205ENST00000547068 POLNQ7Z5Q5 900 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 LILRA2Q8N149 483 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 RTKNQ9BST9 563 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 PNPOQ9NVS9 261 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 ZC3H7BQ9UGR2 993 aaKnown RBP11.02□□□□□ -0.65
NPAS3-205ENST00000547068 COQ6Q9Y2Z9 468 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 TMED5Q9Y3A6 229 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 NR2E3Q9Y5X4 410 aa11.02□□□□□ -0.65
NPAS3-205ENST00000547068 FUOMA2VDF0 154 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 H6PDO95479 791 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 MMP8P22894 467 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 PRDX6P30041 224 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 KCNT1Q5JUK3 1230 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 MAP1SQ66K74 1059 aaPredicted RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 LMBRD2Q68DH5 695 aaPredicted RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 MIER3Q7Z3K6 550 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 ADGRF2Q8IZF7 708 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 LZTR1Q8N653 840 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 HSPH1Q92598 858 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 ZNF512Q96ME7 567 aaPredicted RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 RANBP9Q96S59 729 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 PKP2Q99959 881 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 GLIS2Q9BZE0 524 aaPredicted RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 INO80BQ9C086 356 aaPredicted RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 TUT1Q9H6E5 874 aaKnown RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 CAAP1Q9H8G2 361 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 SMYD2Q9NRG4 433 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 PKD2L1Q9P0L9 805 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 NYAP2Q9P242 653 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 ZBTB21Q9ULJ3 1066 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 SMCHD1A6NHR9 2005 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 TRDMT1O14717 391 aaKnown RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 OCM2P0CE71 109 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 OCMP0CE72 109 aaPredicted RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 FGF3P11487 239 aaPredicted RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 ACO1P21399 889 aaKnown RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 KCNA4P22459 653 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 PRKCHP24723 683 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 SLC5A3P53794 718 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 KCNJ11Q14654 390 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 FSCBQ5H9T9 825 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 C16orf46Q6P387 395 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 B3GNT9Q6UX72 402 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 TMEM179Q6ZVK1 233 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 TRPC4APQ8TEL6 797 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 KBTBD7Q8WVZ9 684 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 C17orf50Q8WW18 174 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 FAF2Q96CS3 445 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 KIFC3Q9BVG8 833 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 PAIP1Q9H074 479 aaKnown RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 IGSF9Q9P2J2 1179 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 BCAP29Q9UHQ4 241 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 HEY1Q9Y5J3 304 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 FADS3Q9Y5Q0 445 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 GREB1LQ9C091 1923 aaPredicted RBP11.01□□□□□ -0.65
NPAS3-205ENST00000547068 SIPA1L1O43166 1804 aa11.01□□□□□ -0.65
NPAS3-205ENST00000547068 AIM2O14862 343 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 MCF2LO15068 1137 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 GDF11O95390 407 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 CALB1P05937 261 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 CSH1P0DML2 217 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 CSH2P0DML3 217 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 MSX2P35548 267 aaPredicted RBP11□□□□□ -0.65
NPAS3-205ENST00000547068 PPARGP37231 505 aaPredicted RBP11□□□□□ -0.65
NPAS3-205ENST00000547068 CAP2P40123 477 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 GABRB2P47870 512 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 NUDT2P50583 147 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 YWHAZP63104 245 aaKnown RBP11□□□□□ -0.65
NPAS3-205ENST00000547068 FAM102BQ5T8I3 360 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 WDR78Q5VTH9 848 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 CHERPQ8IWX8 916 aaKnown RBP11□□□□□ -0.65
NPAS3-205ENST00000547068 ZNF516Q92618 1163 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 CDCA5Q96FF9 252 aa11□□□□□ -0.65
NPAS3-205ENST00000547068 FBXL18Q96ME1 805 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms