RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SDE2Q6IQ49 451 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 KRBA2Q6ZNG9 492 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 TADA2BQ86TJ2 420 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 PROSER1Q86XN7 944 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 TMPRSS6Q8IU80 811 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 DENND1CQ8IV53 801 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 SMYD4Q8IYR2 804 aaPredicted RBP13.15□□□□□ -0.3
COPS7A-221ENST00000546229 ANKRD52Q8NB46 1076 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 WFDC5Q8TCV5 224 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 NDRG1Q92597 394 aaKnown RBP13.15□□□□□ -0.3
COPS7A-221ENST00000546229 TATDN2Q93075 761 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 PLD4Q96BZ4 506 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 TMEM176AQ96HP8 235 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 LMLNQ96KR4 655 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 GPR174Q9BXC1 333 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 SLC2A11Q9BYW1 496 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 DCLK3Q9C098 648 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 FNDC3AQ9Y2H6 1198 aaKnown RBP13.15□□□□□ -0.3
COPS7A-221ENST00000546229 ADAMTS20P59510 1910 aa13.15□□□□□ -0.3
COPS7A-221ENST00000546229 PLXNA2O75051 1894 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 A0A1B0GTW7 788 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 METTL12A8MUP2 240 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 IGLV3-27P01718 113 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 RALAP11233 206 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 SYKP43405 635 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 ATXN3P54252 364 aaPredicted RBP13.14□□□□□ -0.31
COPS7A-221ENST00000546229 YWHAGP61981 247 aaKnown RBP eCLIP13.14□□□□□ -0.31
COPS7A-221ENST00000546229 STARD3Q14849 445 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 TRIP6Q15654 476 aaKnown RBP13.14□□□□□ -0.31
COPS7A-221ENST00000546229 WDR45BQ5MNZ6 344 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 DCAF12L1Q5VU92 463 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 SLCO6A1Q86UG4 719 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 ADIPOR2Q86V24 386 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 FBXL13Q8NEE6 735 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 EEF2KMTQ96G04 330 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 ZSWIM1Q9BR11 485 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 ULBP1Q9BZM6 244 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 ZDHHC5Q9C0B5 715 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 MMRN2Q9H8L6 949 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 RAB20Q9NX57 234 aa13.14□□□□□ -0.31
COPS7A-221ENST00000546229 KNL1Q8NG31 2342 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 SLC12A8A0AV02 714 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 YJEFN3A6XGL0 299 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 E7ENQ6 273 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 O00370 1275 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 XPO1O14980 1071 aaKnown RBP13.13□□□□□ -0.31
COPS7A-221ENST00000546229 NDUFS2O75306 463 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 ZBED1O96006 694 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 HLA-EP13747 358 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 TKTL1P51854 596 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 PMS1P54277 932 aaKnown RBP13.13□□□□□ -0.31
COPS7A-221ENST00000546229 PDE4CQ08493 712 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 ADAM9Q13443 819 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 GOLGA7BQ2TAP0 167 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 COBLL1Q53SF7 1204 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 SYCP2LQ5T4T6 812 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 MSANTD2Q6P1R3 559 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-221ENST00000546229 HSCBQ8IWL3 235 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 RGL4Q8IZJ4 473 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 SCML4Q8N228 414 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 ARHGAP18Q8N392 663 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 SIPA1Q96FS4 1042 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 MYO19Q96H55 970 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 HEXIM2Q96MH2 286 aaKnown RBP13.13□□□□□ -0.31
COPS7A-221ENST00000546229 PCED1AQ9H1Q7 454 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 TSPAN16Q9UKR8 245 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 GPSM3Q9Y4H4 160 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 COL5A1P20908 1838 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-221ENST00000546229 BPTFQ12830 3046 aa13.13□□□□□ -0.31
COPS7A-221ENST00000546229 CABIN1Q9Y6J0 2220 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 MEI4A8MW99 385 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 MSI1O43347 362 aaKnown RBP13.12□□□□□ -0.31
COPS7A-221ENST00000546229 KIF20AO95235 890 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 LATS1O95835 1130 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 KRT13P13646 458 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 ACSL1P33121 698 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 BCAT1P54687 386 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 ADIGQ0VDE8 80 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 FAM133BQ5BKY9 247 aaKnown RBP13.12□□□□□ -0.31
COPS7A-221ENST00000546229 CACUL1Q86Y37 369 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 FMNL3Q8IVF7 1028 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 TTC39CQ8N584 583 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 PNPLA1Q8N8W4 532 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 OR2T3Q8NH03 318 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 MYEOVQ96EZ4 313 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 SPATA32Q96LK8 384 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 C6orf106Q9H6K1 298 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-221ENST00000546229 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-221ENST00000546229 HBS1LQ9Y450 684 aaKnown RBP13.12□□□□□ -0.31
COPS7A-221ENST00000546229 ACACAQ13085 2346 aa13.12□□□□□ -0.31
COPS7A-221ENST00000546229 BCAT2O15382 392 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-221ENST00000546229 EPHX1P07099 455 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 GNSP15586 552 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 TRIM21P19474 475 aaKnown RBP13.11□□□□□ -0.31
COPS7A-221ENST00000546229 RPL13P26373 211 aaKnown RBP13.11□□□□□ -0.31
COPS7A-221ENST00000546229 OXTRP30559 389 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 DAOAP59103 153 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms