RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 EMBQ6PCB8 327 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 RFX8Q6ZV50 586 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 TADA2BQ86TJ2 420 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 ALLCQ8N6M5 410 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 CCDC89Q8N998 374 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 CCHCR1Q8TD31 782 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 AENQ8WTP8 325 aaKnown RBP20.13■□□□□ 0.81
SKP2-208ENST00000546211 ZNF512Q96ME7 567 aaPredicted RBP20.13■□□□□ 0.81
SKP2-208ENST00000546211 EPAS1Q99814 870 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 HEY1Q9Y5J3 304 aa20.13■□□□□ 0.81
SKP2-208ENST00000546211 I6L893 689 aaPredicted RBP20.12■□□□□ 0.81
SKP2-208ENST00000546211 KRT14P02533 472 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 RBP3P10745 1247 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 HMGA1P17096 107 aaKnown RBP20.12■□□□□ 0.81
SKP2-208ENST00000546211 HCAR3P49019 387 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 TBX4P57082 545 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 TPI1P60174 286 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 UBE3AQ05086 875 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 SEMA3BQ13214 749 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 C9orf50Q5SZB4 431 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 TRMT2BQ96GJ1 504 aaKnown RBP20.12■□□□□ 0.81
SKP2-208ENST00000546211 MYRFLQ96LU7 910 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 KLHL5Q96PQ7 755 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 HAPLN3Q96S86 360 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 C17orf80Q9BSJ5 609 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 TMEM121Q9BTD3 319 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 OSBPL2Q9H1P3 480 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 ARHGEF4Q9NR80 690 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 OR12D3Q9UGF7 316 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 IRAK3Q9Y616 596 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 GREB1Q4ZG55 1949 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 CCDC85CA6NKD9 419 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 SGK1O00141 431 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 TGM5O43548 720 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 TLR5O60602 858 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 LPXNO60711 386 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 TNNT3P45378 269 aaPredicted RBP20.12■□□□□ 0.81
SKP2-208ENST00000546211 RPL21P46778 160 aaKnown RBP20.12■□□□□ 0.81
SKP2-208ENST00000546211 NR2C2P49116 596 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 ERVFC1P60507 584 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 NCBP2-AS2Q69YL0 99 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 BZW1Q7L1Q6 419 aaKnown RBP20.12■□□□□ 0.81
SKP2-208ENST00000546211 ITIH5Q86UX2 942 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 ZNF276Q8N554 614 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 SPPL3Q8TCT6 385 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 POF1BQ8WVV4 589 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 RSAD2Q8WXG1 361 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 TLR9Q9NR96 1032 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 TRPM5Q9NZQ8 1165 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 MARCH2Q9P0N8 246 aa20.12■□□□□ 0.81
SKP2-208ENST00000546211 UXTQ9UBK9 157 aaPredicted RBP20.12■□□□□ 0.81
SKP2-208ENST00000546211 PLXNA4Q9HCM2 1894 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 C5orf67F2Z3F1 127 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 FAM72CH0Y354 149 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 H7C0C1 242 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 APOEP02649 317 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 RB1P06400 928 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 KLRC2P26717 231 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 MAGEA10P43363 369 aaPredicted RBP20.11■□□□□ 0.81
SKP2-208ENST00000546211 ATP5OP48047 213 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 CALCOCO2Q13137 446 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 DPYSQ14117 519 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 TRIP13Q15645 432 aaPredicted RBP20.11■□□□□ 0.81
SKP2-208ENST00000546211 TRIP4Q15650 581 aaPredicted RBP20.11■□□□□ 0.81
SKP2-208ENST00000546211 FAM72AQ5TYM5 149 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 SNX30Q5VWJ9 437 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 PLPP4Q5VZY2 271 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 FAM72DQ6L9T8 149 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 DARS2Q6PI48 645 aaKnown RBP20.11■□□□□ 0.81
SKP2-208ENST00000546211 CCDC149Q6ZUS6 474 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 ZC3H18Q86VM9 953 aaKnown RBP20.11■□□□□ 0.81
SKP2-208ENST00000546211 FAM72BQ86X60 149 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 MIB1Q86YT6 1006 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 SLC39A13Q96H72 371 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 CCSER2Q9H7U1 834 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 ZNF446Q9NWS9 450 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 NEU2Q9Y3R4 380 aa20.11■□□□□ 0.81
SKP2-208ENST00000546211 KCNU1A8MYU2 1149 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 PAGE1O75459 146 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 TBX18O95935 607 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 SPATA31D3P0C874 917 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 MYOGP15173 224 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 ADCY8P40145 1251 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 PPP3CCP48454 512 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 KPNA1P52294 538 aaPredicted RBP20.1■□□□□ 0.81
SKP2-208ENST00000546211 SHHQ15465 462 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 SPATA31D4Q6ZUB0 917 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 DNAJB7Q7Z6W7 309 aaPredicted RBP20.1■□□□□ 0.81
SKP2-208ENST00000546211 CAVIN3Q969G5 261 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 PSMG2Q969U7 264 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 SNF8Q96H20 258 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 FCRL2Q96LA5 508 aaPredicted RBP20.1■□□□□ 0.81
SKP2-208ENST00000546211 FAM129AQ9BZQ8 928 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 NACA2Q9H009 215 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 SIK2Q9H0K1 926 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 SLC12A6Q9UHW9 1150 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 ASB3Q9Y575 518 aa20.1■□□□□ 0.81
SKP2-208ENST00000546211 ZNF638Q14966 1978 aaKnown RBP20.1■□□□□ 0.81
SKP2-208ENST00000546211 SLC12A8A0AV02 714 aa20.09■□□□□ 0.81
SKP2-208ENST00000546211 ZNF840PA6NDX5 716 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms