RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-225	ENST00000545930	ZNF569	Q5MCW4	686 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	BRMS1L	Q5PSV4	323 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	RARS2	Q5T160	578 aa	Known RBP	10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	EP400NL	Q6ZTU2	488 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	GRASP	Q7Z6J2	395 aa	Predicted RBP	10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	DDX42	Q86XP3	938 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	TMC8	Q8IU68	726 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	RHOT1	Q8IXI2	618 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	MICALL1	Q8N3F8	863 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	DEFB123	Q8N688	67 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	UBL4B	Q8N7F7	174 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	FAM172A	Q8WUF8	416 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	EDEM1	Q92611	657 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	ZNF707	Q96C28	371 aa	Predicted RBP	10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	PIWIL1	Q96J94	861 aa	Known RBP	10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	NECTIN4	Q96NY8	510 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	TBCB	Q99426	244 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	CDX2	Q99626	313 aa	Predicted RBP	10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	DCLK3	Q9C098	648 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	SMOC2	Q9H3U7	446 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	TASP1	Q9H6P5	420 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	WDCP	Q9H6R7	721 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	FAM204A	Q9H8W3	233 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	NMUR1	Q9HB89	426 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	ZNF334	Q9HCZ1	680 aa	Predicted RBP	10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	DDIT4	Q9NX09	232 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	DDX56	Q9NY93	547 aa	Known RBP	10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	TRIM10	Q9UDY6	481 aa		10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.1	□□□□□ -0.79
DDB1-225	ENST00000545930	DENND4C	Q5VZ89	1909 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930		A0A1W2PRU2	124 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	TMEM110-MUSTN1	A8MSY1	372 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	ESPN	B1AK53	854 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	GLP2R	O95838	553 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	OAS1	P00973	400 aa	Known RBP	10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	FYN	P06241	537 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	FOSL2	P15408	326 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	WEE1	P30291	646 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	AVPR1A	P37288	418 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	SSR1	P43307	286 aa	Known RBP	10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	ZNF135	P52742	658 aa	Predicted RBP	10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	ETF1	P62495	437 aa	Known RBP	10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	ATP11A	P98196	1134 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	RING1	Q06587	406 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	DHX9	Q08211	1270 aa	Known RBP	10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	EFEMP1	Q12805	493 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	COL19A1	Q14993	1142 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	TRIP4	Q15650	581 aa	Predicted RBP	10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	CDO1	Q16878	200 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	LRRC38	Q5VT99	294 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	SYPL2	Q5VXT5	272 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	NUGGC	Q68CJ6	796 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	SCYL2	Q6P3W7	929 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	SYCE2	Q6PIF2	218 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	GAREM2	Q75VX8	874 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	POLN	Q7Z5Q5	900 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	PSTK	Q8IV42	348 aa	Known RBP	10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	MAP7D3	Q8IWC1	876 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	C12orf76	Q8N812	135 aa	Predicted RBP	10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	ATP6V0D2	Q8N8Y2	350 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	DQX1	Q8TE96	717 aa	Known RBP	10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	PLD4	Q96BZ4	506 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	DDX50	Q9BQ39	737 aa	Known RBP	10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	SLITRK6	Q9H5Y7	841 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	SLC24A3	Q9HC58	644 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	TRPC7	Q9HCX4	862 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	WDR6	Q9NNW5	1121 aa	Known RBP	10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	OSER1	Q9NX31	292 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	MARCH2	Q9P0N8	246 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	SALL4	Q9UJQ4	1053 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	USP18	Q9UMW8	372 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	UST	Q9Y2C2	406 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	ZNF510	Q9Y2H8	683 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930	ANAPC1	Q9H1A4	1944 aa		10.09	□□□□□ -0.79
DDB1-225	ENST00000545930		A0A0U1RQJ8	604 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	SLC12A8	A0AV02	714 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	GRID2IP	A4D2P6	1211 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	CTAGE9	A4FU28	777 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	USP27X	A6NNY8	438 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	LINC01565	O15544	149 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	IRAK2	O43187	625 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	COCH	O43405	550 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	PSTPIP1	O43586	416 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	ZNF500	O60304	480 aa	Predicted RBP	10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	LRCH4	O75427	683 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	GJB6	O95452	261 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	APOE	P02649	317 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	MBL2	P11226	248 aa	Predicted RBP	10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	COMT	P21964	271 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	CASQ1	P31415	396 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	HARS2	P49590	506 aa	Known RBP	10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	CXCR3	P49682	368 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	TBX4	P57082	545 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	SLC7A9	P82251	487 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	NME3	Q13232	169 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	PPP2R5D	Q14738	602 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	RPS6KA1	Q15418	735 aa		10.08	□□□□□ -0.8
DDB1-225	ENST00000545930	SKIV2L	Q15477	1246 aa	Known RBP	10.08	□□□□□ -0.8

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