RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 TBCBQ99426 244 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 PPP1R12CQ9BZL4 782 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 XAB2Q9HCS7 855 aaKnown RBP16.3■□□□□ 0.2
LDLR-204ENST00000545707 SNTG2Q9NY99 539 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 MOCS1Q9NZB8 636 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 TRIP11Q15643 1979 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 TPP1O14773 563 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 BAG2O95816 211 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 SLC26A2P50443 739 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 RAP1GDS1P52306 607 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 SLC25A3Q00325 362 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 FAM91A1Q658Y4 838 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 RSPH3Q86UC2 560 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 PHC3Q8NDX5 983 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 MTBPQ96DY7 904 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 NFKBIZQ9BYH8 718 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 ZNF358Q9NW07 568 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 SEPT10Q9P0V9 454 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 KIAA1257Q9ULG3 409 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 LOC285556D6RIA3 1793 aa16.3■□□□□ 0.2
LDLR-204ENST00000545707 EME2A4GXA9 379 aaPredicted RBP16.29■□□□□ 0.2
LDLR-204ENST00000545707 SORBS2O94875 1100 aaKnown RBP16.29■□□□□ 0.2
LDLR-204ENST00000545707 NPTXRO95502 500 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 LMO2P25791 158 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 MGAT1P26572 445 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 GTF2A2P52657 109 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 AP1B1Q10567 949 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 GRIK3Q13003 919 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 PDE1CQ14123 709 aaPredicted RBP16.29■□□□□ 0.2
LDLR-204ENST00000545707 DPYSL2Q16555 572 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 CMPK2Q5EBM0 449 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 ZNF618Q5T7W0 954 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 RNF220Q5VTB9 566 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 NCBP2-AS2Q69YL0 99 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 SESTD1Q86VW0 696 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 TP53INP2Q8IXH6 220 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 PIDD1Q9HB75 910 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 GJD2Q9UKL4 321 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 LRCH1Q9Y2L9 728 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 C2CD2Q9Y426 696 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 POLR2AP24928 1970 aaKnown RBP16.29■□□□□ 0.2
LDLR-204ENST00000545707 MYO18AQ92614 2054 aaKnown RBP16.29■□□□□ 0.2
LDLR-204ENST00000545707 DNAH12Q6ZR08 3092 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 DNAJC25-GNG10A0A024R161 153 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 A8MXQ7 604 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 MAGEC1O60732 1142 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 TM7SF2O76062 418 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 SP100P23497 879 aaPredicted RBP16.29■□□□□ 0.2
LDLR-204ENST00000545707 ARRB2P32121 409 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 PITX1P78337 314 aaPredicted RBP16.29■□□□□ 0.2
LDLR-204ENST00000545707 ARHGAP1Q07960 439 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 TTLL4Q14679 1199 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 KIZQ2M2Z5 673 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 VWA5B1Q5TIE3 1220 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 C1orf146Q5VVC0 180 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 ARHGAP24Q8N264 748 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 COLGALT1Q8NBJ5 622 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 SLC16A10Q8TF71 515 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 AFG1LQ8WV93 481 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 HTR3CQ8WXA8 447 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 ATXN7L3BQ96GX2 97 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 MPHOSPH6Q99547 160 aaKnown RBP16.29■□□□□ 0.2
LDLR-204ENST00000545707 DDX50Q9BQ39 737 aaKnown RBP16.29■□□□□ 0.2
LDLR-204ENST00000545707 XPNPEP3Q9NQH7 507 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 PNPOQ9NVS9 261 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 THAP1Q9NVV9 213 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 SCN1AP35498 2009 aa16.29■□□□□ 0.2
LDLR-204ENST00000545707 CENPFP49454 3210 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 SDR42E2A6NKP2 422 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 MAP3K7O43318 606 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 FGF3P11487 239 aaPredicted RBP16.28■□□□□ 0.2
LDLR-204ENST00000545707 SKIP12755 728 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 TPSB2P20231 275 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 CBLBQ13191 982 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 SEMA5AQ13591 1074 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 PEX6Q13608 980 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 TPSAB1Q15661 275 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 RALGPS1Q5JS13 557 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 TEDDM1Q5T9Z0 273 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 MBLAC2Q68D91 279 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 PPFIBP2Q8ND30 876 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 GSTCDQ8NEC7 633 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 USP6NLQ92738 828 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 QKIQ96PU8 341 aaKnown RBP eCLIP16.28■□□□□ 0.2
LDLR-204ENST00000545707 MKS1Q9NXB0 559 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 PPM1HQ9ULR3 514 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 MAGED2Q9UNF1 606 aaPredicted RBP16.28■□□□□ 0.2
LDLR-204ENST00000545707 WDR90Q96KV7 1748 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 ADCY6O43306 1168 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 ERVK-10P10266 1014 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 ANPEPP15144 967 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 SLC1A6P48664 564 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 STILQ15468 1287 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 ZNF484Q5JVG2 852 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 THEMIS2Q5TEJ8 643 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 POTEAQ6S8J7 498 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 PACS1Q6VY07 963 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 C10orf107Q8IVU9 208 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 EFCAB3Q8N7B9 438 aa16.28■□□□□ 0.2
LDLR-204ENST00000545707 TFB1MQ8WVM0 346 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms