RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 BCAT1P54687 386 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 C21orf59P57076 290 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 RACK1P63244 317 aaKnown RBP9.86□□□□□ -0.83
CHD4-212ENST00000545083 KCNC4Q03721 635 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 TRPC3Q13507 836 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 ARHGAP40Q5TG30 622 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 RRAGBQ5VZM2 374 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 CLEC20AQ6ZU45 233 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 ZC3H3Q8IXZ2 948 aaKnown RBP9.86□□□□□ -0.83
CHD4-212ENST00000545083 C12orf29Q8N999 325 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 CYB5D2Q8WUJ1 264 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 WBP1Q96G27 269 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 TNIP3Q96KP6 325 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 ACE2Q9BYF1 805 aaPredicted RBP9.86□□□□□ -0.83
CHD4-212ENST00000545083 TMEM245Q9H330 911 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 VRTNQ9H8Y1 702 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 PRSS16Q9NQE7 514 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 FAM49BQ9NUQ9 324 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 UNC79Q9P2D8 2635 aa9.86□□□□□ -0.83
CHD4-212ENST00000545083 AGO1Q9UL18 857 aaKnown RBP9.86□□□□□ -0.83
CHD4-212ENST00000545083 MYH10P35580 1976 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 A0A1W2PPC4 97 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 CLIC2O15247 247 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 TGFB1I1O43294 461 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 DFNA5O60443 496 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 WISP1O95388 367 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 BMP15O95972 392 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 ABCB4P21439 1286 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 GLDCP23378 1020 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 GJB2P29033 226 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 ADORA2BP29275 332 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 EPHA8P29322 1005 aaPredicted RBP9.85□□□□□ -0.83
CHD4-212ENST00000545083 HLA-FP30511 346 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 CORO1AP31146 461 aaKnown RBP9.85□□□□□ -0.83
CHD4-212ENST00000545083 ACTN2P35609 894 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 CHKAP35790 457 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 CASP4P49662 377 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 CYP2J2P51589 502 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 RHDQ02161 417 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 SRSF1Q07955 248 aaKnown RBP eCLIP9.85□□□□□ -0.83
CHD4-212ENST00000545083 BNIP3Q12983 259 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 ZNF699Q32M78 642 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 PKDCCQ504Y2 493 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 KIAA0895LQ68EN5 471 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 DENND1CQ8IV53 801 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 DCBLD1Q8N8Z6 715 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 TTC9Q92623 222 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 SYAP1Q96A49 352 aaPredicted RBP9.85□□□□□ -0.83
CHD4-212ENST00000545083 CLIC6Q96NY7 704 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 LGMNQ99538 433 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 ARID3AQ99856 593 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 MTG2Q9H4K7 406 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 SGK2Q9HBY8 427 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 KIAA1586Q9HCI6 787 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 AGPAT3Q9NRZ7 376 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 CCDC39Q9UFE4 941 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 FBXO2Q9UK22 296 aaPredicted RBP9.85□□□□□ -0.83
CHD4-212ENST00000545083 NAGPAQ9UK23 515 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 KIF3AQ9Y496 699 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 PCDHB1Q9Y5F3 818 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 PLXNA2O75051 1894 aa9.85□□□□□ -0.83
CHD4-212ENST00000545083 A0A1W2PR77 199 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 FAM47DPA6NHR8 397 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 C10orf142B7Z368 130 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 VNN1O95497 513 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 DNTTP04053 509 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 C6P13671 934 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 HOXD9P28356 352 aaPredicted RBP9.84□□□□□ -0.83
CHD4-212ENST00000545083 KIF11P52732 1056 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 NDST1P52848 882 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 INSM1Q01101 510 aaPredicted RBP9.84□□□□□ -0.83
CHD4-212ENST00000545083 EFEMP1Q12805 493 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 KCNJ12Q14500 433 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 FNDC3BQ53EP0 1204 aaKnown RBP9.84□□□□□ -0.83
CHD4-212ENST00000545083 ZNF667Q5HYK9 610 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 SFMBT2Q5VUG0 894 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 KANSL1Q7Z3B3 1105 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 CRYBG2Q8N1P7 616 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 RFFLQ8WZ73 363 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 HIC2Q96JB3 615 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 TWNKQ96RR1 684 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 HNRNPABQ99729 332 aaKnown RBP9.84□□□□□ -0.83
CHD4-212ENST00000545083 PANK2Q9BZ23 570 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 SERGEFQ9UGK8 458 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 RASAL2Q9UJF2 1139 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 CLCA2Q9UQC9 943 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 ZNF510Q9Y2H8 683 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 PCDHA5Q9Y5H7 936 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 CLIC4Q9Y696 253 aa9.84□□□□□ -0.83
CHD4-212ENST00000545083 TP53BP1Q12888 1972 aaPredicted RBP9.84□□□□□ -0.83
CHD4-212ENST00000545083 UBR5O95071 2799 aaPredicted RBP9.84□□□□□ -0.83
CHD4-212ENST00000545083 TIMM44O43615 452 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 SLC28A2O43868 658 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 PHACTR2O75167 634 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 CLSTN1O94985 981 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 CYBBP04839 570 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 CENPBP07199 599 aaPredicted RBP9.83□□□□□ -0.84
CHD4-212ENST00000545083 FAM200BP0CF97 657 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 GALCP54803 685 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 TMPRSS3P57727 454 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms