RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SPON1Q9HCB6 807 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 THAP1Q9NVV9 213 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 DDIT4Q9NX09 232 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 BTBD7Q9P203 1132 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 ZNF214Q9UL59 606 aaPredicted RBP5.95□□□□□ -1.46
VPS50-220ENST00000544910 NENFQ9UMX5 172 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 CCDC78A2IDD5 438 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 FCHO1O14526 889 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 SERPINI2O75830 405 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 F9P00740 461 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 GRK2P25098 689 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 SERPINB3P29508 390 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 PRAMEP78395 509 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 OCRLQ01968 901 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 C1orf220Q5T0J3 134 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 KCNT2Q6UVM3 1135 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 SETD3Q86TU7 594 aaPredicted RBP5.95□□□□□ -1.46
VPS50-220ENST00000544910 DEFB106AQ8N104 65 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 STKLD1Q8NE28 680 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 PPTC7Q8NI37 304 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 CALML6Q8TD86 181 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 MAGEC3Q8TD91 643 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 C7orf43Q8WVR3 580 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 ZBTB10Q96DT7 871 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 CPXM1Q96SM3 734 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 PHACTR1Q9C0D0 580 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 FAM124BQ9H5Z6 455 aaPredicted RBP5.95□□□□□ -1.46
VPS50-220ENST00000544910 PAPOLBQ9NRJ5 636 aaKnown RBP5.95□□□□□ -1.46
VPS50-220ENST00000544910 ADA2Q9NZK5 511 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 SLC12A4Q9UP95 1085 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 ANGPTL3Q9Y5C1 460 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 MAGEB16A2A368 324 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 FOXO6A8MYZ6 492 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 RNF103O00237 685 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 TPP1O14773 563 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 STRNO43815 780 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 EDF1O60869 148 aaKnown RBP5.95□□□□□ -1.46
VPS50-220ENST00000544910 SERPINE1P05121 402 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 KRT8P05787 483 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 RALBP11234 206 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 GFAPP14136 432 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 ACO1P21399 889 aaKnown RBP5.95□□□□□ -1.46
VPS50-220ENST00000544910 CASP2P42575 452 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 NSUN2Q08J23 767 aaKnown RBP eCLIP5.95□□□□□ -1.46
VPS50-220ENST00000544910 PCBP1Q15365 356 aaKnown RBP eCLIP5.95□□□□□ -1.46
VPS50-220ENST00000544910 RBBP7Q16576 425 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 EMC10Q5UCC4 262 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 LBX2Q6XYB7 198 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 KYAT3Q6YP21 454 aaKnown RBP5.95□□□□□ -1.46
VPS50-220ENST00000544910 TDRD5Q8NAT2 981 aaKnown RBP5.95□□□□□ -1.46
VPS50-220ENST00000544910 SHCBP1Q8NEM2 672 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 SH3TC2Q8TF17 1288 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 AGAP11Q8TF27 550 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 GIPC2Q8TF65 315 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 DNAJB3Q8WWF6 145 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 CPT1BQ92523 772 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 CAMKK2Q96RR4 588 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 DDX43Q9NXZ2 648 aaKnown RBP5.95□□□□□ -1.46
VPS50-220ENST00000544910 ANKRD6Q9Y2G4 727 aa5.95□□□□□ -1.46
VPS50-220ENST00000544910 A0A0A0MRY4 1105 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SNX2O60749 519 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 LRCH4O75427 683 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 CFHP08603 1231 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SP2Q02086 613 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 FASTKD3Q14CZ7 662 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 PPP1R26Q5T8A7 1209 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 C9orf131Q5VYM1 1079 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SCARA3Q6AZY7 606 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 TIGD7Q6NT04 549 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 ADGRD1Q6QNK2 874 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 VSTM1Q6UX27 236 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 USP50Q70EL3 339 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 TAS1R3Q7RTX0 852 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 LCA5Q86VQ0 697 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 KIAA0319LQ8IZA0 1049 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SLC25A41Q8N5S1 370 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SLC4A11Q8NBS3 891 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 STK32AQ8WU08 396 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 TFAP2BQ92481 460 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 KAT2BQ92831 832 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 FAXDC2Q96IV6 333 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 SPATA13Q96N96 652 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 MMADHCQ9H3L0 296 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 RUVBL2Q9Y230 463 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 TCRBV9S1A1TA0A576 114 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 TRPC5OSA6NMA1 111 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 DNM1LO00429 736 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 TNPO2O14787 897 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 DNAJC6O75061 913 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 CYP2B6P20813 491 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 RGS2P41220 211 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 BNIP1Q12981 228 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 TAF1CQ15572 869 aaPredicted RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 PARP6Q2NL67 630 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 TMCO5AQ8N6Q1 288 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 DDI1Q8WTU0 396 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 NAF1Q96HR8 494 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 WARS2Q9UGM6 360 aaKnown RBP5.94□□□□□ -1.46
VPS50-220ENST00000544910 STYXL1Q9Y6J8 313 aa5.94□□□□□ -1.46
VPS50-220ENST00000544910 GPR182O15218 404 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms