RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 AVILO75366 819 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 CBX6O95503 412 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 METTL18O95568 372 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 TPBGLP0DKB5 382 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 GNAZP19086 355 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 BGNP21810 368 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 GRK2P25098 689 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 ANKRD20A2Q5SQ80 823 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 GJC2Q5T442 439 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-215ENST00000544909 ANKRD20A1Q5TYW2 823 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 GPR142Q7Z601 462 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 DPP9Q86TI2 863 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 LCA5Q86VQ0 697 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 LONP2Q86WA8 852 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 APLFQ8IW19 511 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-215ENST00000544909 TEX9Q8N6V9 391 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 B3GALNT2Q8NCR0 500 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 RFWD2Q8NHY2 731 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 N4BP2L2Q92802 583 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-215ENST00000544909 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 NPY6RQ99463 290 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 VAT1Q99536 393 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 CXorf56Q9H5V9 222 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 GPATCH2LQ9NWQ4 482 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 STOML1Q9UBI4 398 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 DCDC2Q9UHG0 476 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 DCTN4Q9UJW0 460 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 Q9Y3F1 56 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 L3MBTL1Q9Y468 752 aa12.85□□□□□ -0.35
PAAF1-215ENST00000544909 F8W8V4 182 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 RPLP2P05387 115 aaKnown RBP12.84□□□□□ -0.35
PAAF1-215ENST00000544909 CSH1P0DML2 217 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 CSH2P0DML3 217 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 RARBP10826 455 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 CYP2C9P11712 490 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 NPR3P17342 541 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 PAX3P23760 479 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 SERPINB3P29508 390 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 CDK7P50613 346 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 RAP1GDS1P52306 607 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 NRLP54845 237 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 TMPRSS15P98073 1019 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 SLC10A2Q12908 348 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-215ENST00000544909 NBPF20Q3BBV1 942 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 DNAL1Q4LDG9 190 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 TMPRSS6Q8IU80 811 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 NUDCD3Q8IVD9 361 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 ADGRF2Q8IZF7 708 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 TMEM86AQ8N2M4 240 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 STKLD1Q8NE28 680 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 DEPDC1BQ8WUY9 529 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 STON2Q8WXE9 905 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 KLF6Q99612 283 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-215ENST00000544909 KATNAL1Q9BW62 490 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 EIF2AQ9BY44 585 aaKnown RBP12.84□□□□□ -0.35
PAAF1-215ENST00000544909 B3GNT5Q9BYG0 378 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 SLC38A7Q9NVC3 462 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.84□□□□□ -0.35
PAAF1-215ENST00000544909 MAD1L1Q9Y6D9 718 aa12.84□□□□□ -0.35
PAAF1-215ENST00000544909 WDR91A4D1P6 747 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 IQCA1LA6NCM1 817 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 CAPN14A8MX76 684 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 CXorf49A8MYA2 514 aaPredicted RBP12.83□□□□□ -0.35
PAAF1-215ENST00000544909 HAS3O00219 553 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 GABRDO14764 452 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 PPEF2O14830 753 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 GYG2O15488 501 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 KIF1CO43896 1103 aaKnown RBP12.83□□□□□ -0.35
PAAF1-215ENST00000544909 SMIM10L2AP0DMW4 78 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 SMIM10L2BP0DMW5 78 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 MYL2P10916 166 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 CCDC130P13994 396 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 EPHB2P29323 1055 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 HOXC8P31273 242 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 HADHAP40939 763 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 CRYBB1P53674 252 aaPredicted RBP12.83□□□□□ -0.35
PAAF1-215ENST00000544909 BST1Q10588 318 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 SPANXN3Q5MJ09 141 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 DLK2Q6UY11 383 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 CDHR3Q6ZTQ4 885 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 MOB2Q70IA6 237 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 PLEKHH3Q7Z736 793 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 WDR75Q8IWA0 830 aaKnown RBP12.83□□□□□ -0.35
PAAF1-215ENST00000544909 NDUFAF2Q8N183 169 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 SMC1BQ8NDV3 1235 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 SLC2A14Q8TDB8 520 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 RNF139Q8WU17 664 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 C18orf25Q96B23 403 aaPredicted RBP12.83□□□□□ -0.35
PAAF1-215ENST00000544909 NUDCD1Q96RS6 583 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 TRIM62Q9BVG3 475 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 NXF3Q9H4D5 531 aaKnown RBP12.83□□□□□ -0.35
PAAF1-215ENST00000544909 SMYD2Q9NRG4 433 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 DNAJB4Q9UDY4 337 aa12.83□□□□□ -0.35
PAAF1-215ENST00000544909 TRIP11Q15643 1979 aa12.83□□□□□ -0.36
PAAF1-215ENST00000544909 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.83□□□□□ -0.36
PAAF1-215ENST00000544909 MAGEB16A2A368 324 aa12.83□□□□□ -0.36
PAAF1-215ENST00000544909 HMX2A2RU54 273 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms