RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CORO7P57737 925 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 CDH17Q12864 832 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 DAB2IPQ5VWQ8 1189 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 CYB5D1Q6P9G0 228 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 CCDC81Q6ZN84 652 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 TMC3Q7Z5M5 1100 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 PLD3Q8IV08 490 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 LGI2Q8N0V4 545 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 B3GALNT2Q8NCR0 500 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 BTN2A2Q8WVV5 523 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 FAM84AQ96KN4 292 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 ACOX2Q99424 681 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 TBC1D13Q9NVG8 400 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 PGK1P00558 417 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 NQO1P15559 274 aaKnown RBP13.13□□□□□ -0.31
CHD4-211ENST00000544484 KLRC2P26717 231 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 GPC1P35052 558 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 SYTL2Q9HCH5 934 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 H2AFY2Q9P0M6 372 aaPredicted RBP13.13□□□□□ -0.31
CHD4-211ENST00000544484 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.13□□□□□ -0.31
CHD4-211ENST00000544484 TRPV2Q9Y5S1 764 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 UBOX5O94941 541 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 CPSF4O95639 269 aaKnown RBP13.13□□□□□ -0.31
CHD4-211ENST00000544484 RPLP2P05387 115 aaKnown RBP13.13□□□□□ -0.31
CHD4-211ENST00000544484 RBP1P09455 135 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 TNFSF9P41273 254 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 NFYCQ13952 458 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 STARD3Q14849 445 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 KCTD19Q17RG1 926 aaPredicted RBP13.13□□□□□ -0.31
CHD4-211ENST00000544484 WSCD1Q658N2 575 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 IQSEC1Q6DN90 963 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 C16orf59Q7L2K0 433 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 RIOX2Q8IUF8 465 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 PHACTR4Q8IZ21 702 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 C3orf20Q8ND61 904 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 TMEM39AQ9NV64 488 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 NINJ2Q9NZG7 142 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 BLOC1S6Q9UL45 172 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 KLRC4O43908 158 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 MAN1A2O60476 641 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 CYLC2Q14093 348 aaPredicted RBP13.13□□□□□ -0.31
CHD4-211ENST00000544484 KBTBD12Q3ZCT8 623 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 CCDC157Q569K6 752 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 MFSD4BQ5TF39 518 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 KCNMB4Q86W47 210 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 DNAJC19Q96DA6 116 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 EMILIN2Q9BXX0 1053 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 DLGAP2Q9P1A6 1054 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 TRIM17Q9Y577 477 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 SNX13Q9Y5W8 968 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 ASTN1O14525 1302 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 KATNA1O75449 491 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 BAIAP3O94812 1187 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 ALBP02768 609 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 SCTRP47872 440 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 MEA1Q16626 185 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 CYP51A1Q16850 503 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 APBA2Q99767 749 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 TINF2Q9BSI4 451 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 PCNAP12004 261 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 ETS1P14921 441 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 EIF4BP23588 611 aaKnown RBP13.12□□□□□ -0.31
CHD4-211ENST00000544484 ABCG1P45844 678 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 CD151P48509 253 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 PKN2Q16513 984 aaKnown RBP13.12□□□□□ -0.31
CHD4-211ENST00000544484 ZNF470Q6ECI4 717 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 CREG2Q8IUH2 290 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 GNG14A0A1W2PPG7 69 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 LTFP02788 710 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 ZNF23P17027 643 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 HNRNPH1P31943 449 aaKnown RBP13.12□□□□□ -0.31
CHD4-211ENST00000544484 RENBPP51606 427 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 ACTR8Q9H981 624 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 ARHGEF28Q8N1W1 1705 aaKnown RBP13.12□□□□□ -0.31
CHD4-211ENST00000544484 DISP2A7MBM2 1401 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 WNT7AO00755 349 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 PCDH8O95206 1070 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 PSMA4P25789 261 aaKnown RBP13.12□□□□□ -0.31
CHD4-211ENST00000544484 CNTFP26441 200 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 NCALDP61601 193 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 ITIH4Q14624 930 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 ATP13A4Q4VNC1 1196 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 AGKQ53H12 422 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 ZDHHC17Q8IUH5 632 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 SCUBE1Q8IWY4 988 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 DIS3LQ8TF46 1054 aaKnown RBP13.12□□□□□ -0.31
CHD4-211ENST00000544484 FAR2Q96K12 515 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 SMAD5Q99717 465 aaKnown RBP13.12□□□□□ -0.31
CHD4-211ENST00000544484 FHDC1Q9C0D6 1143 aaPredicted RBP13.12□□□□□ -0.31
CHD4-211ENST00000544484 PLSCR1O15162 318 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 RNASEH1O60930 286 aaKnown RBP13.12□□□□□ -0.31
CHD4-211ENST00000544484 VHLP40337 213 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 SLC16A1P53985 500 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 LRRC8BQ6P9F7 803 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 NPNTQ6UXI9 565 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 ZNF614Q8N883 585 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 SOCS4Q8WXH5 440 aa13.12□□□□□ -0.31
CHD4-211ENST00000544484 CCNT2O60583 730 aaKnown RBP13.11□□□□□ -0.31
CHD4-211ENST00000544484 ALDH1A2O94788 518 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms