RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 RGS18Q9NS28 235 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 TCP11X1B4DZS4 312 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 INPPL1O15357 1258 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 PRPF4O43172 522 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPRO-209ENST00000543886 SPAG7O75391 227 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 F9P00740 461 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 VAV1P15498 845 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 TPSB2P20231 275 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 GBP2P32456 591 aaPredicted RBP17.63■□□□□ 0.41
PTPRO-209ENST00000543886 AP1B1Q10567 949 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 SCAPQ12770 1279 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 DPYSQ14117 519 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 PDK1Q15118 436 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 TPSAB1Q15661 275 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 RNF187Q5TA31 235 aaPredicted RBP17.63■□□□□ 0.41
PTPRO-209ENST00000543886 ADGRD1Q6QNK2 874 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 YTHDF3Q7Z739 585 aaKnown RBP17.63■□□□□ 0.41
PTPRO-209ENST00000543886 CTU1Q7Z7A3 348 aaKnown RBP17.63■□□□□ 0.41
PTPRO-209ENST00000543886 ANKS4BQ8N8V4 417 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 CCDC197Q8NCU1 140 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 OR10T2Q8NGX3 314 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 EDEM1Q92611 657 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 PGAP3Q96FM1 320 aaPredicted RBP17.63■□□□□ 0.41
PTPRO-209ENST00000543886 LGMNQ99538 433 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 WDR6Q9NNW5 1121 aaKnown RBP17.63■□□□□ 0.41
PTPRO-209ENST00000543886 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPRO-209ENST00000543886 FBXW11Q9UKB1 542 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 IKBKGQ9Y6K9 419 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 FRMPD3Q5JV73 1810 aa17.63■□□□□ 0.41
PTPRO-209ENST00000543886 A0A0A0MRY4 1105 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 GOLGA6L7A0A1B0GV03 622 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 TCRBV9S1A1TA0A576 114 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 PPP1R12AO14974 1030 aaPredicted RBP17.62■□□□□ 0.41
PTPRO-209ENST00000543886 ITGB1P05556 798 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 TYMPP19971 482 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 TPI1P60174 286 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 IL9RQ01113 521 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 DEFB115Q30KQ5 88 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 DENND5BQ6ZUT9 1274 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 PDZD4Q76G19 769 aaPredicted RBP17.62■□□□□ 0.41
PTPRO-209ENST00000543886 CAND1Q86VP6 1230 aaKnown RBP17.62■□□□□ 0.41
PTPRO-209ENST00000543886 C4orf33Q8N1A6 199 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 SPATA13Q96N96 652 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 PKMYT1Q99640 499 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 TSEN34Q9BSV6 310 aaKnown RBP17.62■□□□□ 0.41
PTPRO-209ENST00000543886 KIF9Q9HAQ2 790 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 TMLHEQ9NVH6 421 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 ZC3H7BQ9UGR2 993 aaKnown RBP17.62■□□□□ 0.41
PTPRO-209ENST00000543886 HTTP42858 3142 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 TRPA1O75762 1119 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 EOMESO95936 686 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 CPP00450 1065 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 SLC18A1P54219 525 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 PAFAH1B3Q15102 231 aaKnown RBP17.62■□□□□ 0.41
PTPRO-209ENST00000543886 PRKD1Q15139 912 aaPredicted RBP17.62■□□□□ 0.41
PTPRO-209ENST00000543886 ANKRD20A2Q5SQ80 823 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 ANKRD20A1Q5TYW2 823 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 ANKRD20A3Q5VUR7 823 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 C6orf89Q6UWU4 347 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 SLC24A5Q71RS6 500 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 BHLHA9Q7RTU4 235 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 URGCPQ8TCY9 931 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 DCAKDQ8WVC6 231 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 LRRC39Q96DD0 335 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 MAGEB18Q96M61 343 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 TGS1Q96RS0 853 aaKnown RBP17.62■□□□□ 0.41
PTPRO-209ENST00000543886 TMEM209Q96SK2 561 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 TRIM62Q9BVG3 475 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 PCDHB8Q9UN66 801 aa17.62■□□□□ 0.41
PTPRO-209ENST00000543886 RNF103O00237 685 aa17.61■□□□□ 0.41
PTPRO-209ENST00000543886 PIAS1O75925 651 aa17.61■□□□□ 0.41
PTPRO-209ENST00000543886 FDFT1P37268 417 aa17.61■□□□□ 0.41
PTPRO-209ENST00000543886 SARNPP82979 210 aaKnown RBP17.61■□□□□ 0.41
PTPRO-209ENST00000543886 YWHAHQ04917 246 aaPredicted RBP17.61■□□□□ 0.41
PTPRO-209ENST00000543886 SEMA5AQ13591 1074 aa17.61■□□□□ 0.41
PTPRO-209ENST00000543886 PM20D1Q6GTS8 502 aa17.61■□□□□ 0.41
PTPRO-209ENST00000543886 CCDC121Q6ZUS5 278 aa17.61■□□□□ 0.41
PTPRO-209ENST00000543886 SPATA2LQ8IUW3 424 aaPredicted RBP17.61■□□□□ 0.41
PTPRO-209ENST00000543886 CCNYQ8ND76 341 aa17.61■□□□□ 0.41
PTPRO-209ENST00000543886 PXYLP1Q8TE99 480 aa17.61■□□□□ 0.41
PTPRO-209ENST00000543886 PAIP2Q9BPZ3 127 aaKnown RBP17.61■□□□□ 0.41
PTPRO-209ENST00000543886 COLEC11Q9BWP8 271 aa17.61■□□□□ 0.41
PTPRO-209ENST00000543886 XAB2Q9HCS7 855 aaKnown RBP17.61■□□□□ 0.41
PTPRO-209ENST00000543886 PNPLA8Q9NP80 782 aa17.61■□□□□ 0.41
PTPRO-209ENST00000543886 ZNF638Q14966 1978 aaKnown RBP17.61■□□□□ 0.41
PTPRO-209ENST00000543886 A0A1W2PPM1 405 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 A0A1W2PQ45 241 aaPredicted RBP17.6■□□□□ 0.41
PTPRO-209ENST00000543886 A0A1W2PQY0 241 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 F8W810 466 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 DCLK1O15075 740 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 OPHN1O60890 802 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 INHBAP08476 426 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 CA4P22748 312 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 GLUD2P49448 558 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 KBTBD12Q3ZCT8 623 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 BSPRYQ5W0U4 402 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 NUGGCQ68CJ6 796 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 C4orf50Q6ZRC1 276 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 PIGWQ7Z7B1 504 aa17.6■□□□□ 0.41
PTPRO-209ENST00000543886 LRRTM3Q86VH5 581 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 285.8 ms