RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	FCRL2	Q96LA5	508 aa	Predicted RBP	12.34	□□□□□ -0.43
DDB1-223	ENST00000543658	SLC22A12	Q96S37	553 aa		12.34	□□□□□ -0.43
DDB1-223	ENST00000543658	SNRNP25	Q9BV90	132 aa	Known RBP	12.34	□□□□□ -0.43
DDB1-223	ENST00000543658	SMG9	Q9H0W8	520 aa	Known RBP	12.34	□□□□□ -0.43
DDB1-223	ENST00000543658	CFAP97	Q9P2B7	532 aa		12.34	□□□□□ -0.43
DDB1-223	ENST00000543658	NR2E1	Q9Y466	385 aa		12.34	□□□□□ -0.43
DDB1-223	ENST00000543658	JRKL	Q9Y4A0	524 aa		12.34	□□□□□ -0.43
DDB1-223	ENST00000543658	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.34	□□□□□ -0.43
DDB1-223	ENST00000543658	TYW5	A2RUC4	315 aa	Known RBP	12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	CTAGE9	A4FU28	777 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	ESPN	B1AK53	854 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	STC2	O76061	302 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	LATS1	O95835	1130 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	CTNNA2	P26232	953 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	WEE1	P30291	646 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	CTNNA1	P35221	906 aa	Known RBP	12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	ARL4A	P40617	200 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	KCNQ1	P51787	676 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	RWDD2B	P57060	319 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	SLC25A11	Q02978	314 aa	Known RBP	12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	SEL1L2	Q5TEA6	688 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	MEI1	Q5TIA1	1274 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	LRRC38	Q5VT99	294 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	MTSS1L	Q765P7	747 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	CHSY1	Q86X52	802 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	PSTK	Q8IV42	348 aa	Known RBP	12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	CCDC50	Q8IVM0	306 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	MAP7D3	Q8IWC1	876 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	YAF2	Q8IY57	180 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	CCDC185	Q8N715	623 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	KCTD6	Q8NC69	237 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	SUSD6	Q92537	303 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	SMARCD2	Q92925	531 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	SLC39A13	Q96H72	371 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	RBM41	Q96IZ5	413 aa	Known RBP	12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	ASB16	Q96NS5	453 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	NAPG	Q99747	312 aa	Predicted RBP	12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	ADAM33	Q9BZ11	813 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	DHX35	Q9H5Z1	703 aa	Known RBP	12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	ZFP14	Q9HCL3	533 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	GKN1	Q9NS71	199 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	ARHGEF38	Q9NXL2	777 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	CALCOCO1	Q9P1Z2	691 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	DNAI1	Q9UI46	699 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	FZD10	Q9ULW2	581 aa		12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	PACSIN2	Q9UNF0	486 aa	Predicted RBP	12.33	□□□□□ -0.44
DDB1-223	ENST00000543658	E2F8	A0AVK6	867 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	LRRD1	A4D1F6	860 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	GRXCR2	A6NFK2	248 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	KCNU1	A8MYU2	1149 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658		F5H5T6	163 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	NRG2	O14511	850 aa	Predicted RBP	12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	SLC9A3R1	O14745	358 aa	Predicted RBP	12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	ACSL4	O60488	711 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	PRAMEF12	O95522	483 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	IGLV3-27	P01718	113 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	TCF3	P15923	654 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	SP100	P23497	879 aa	Predicted RBP	12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	ADRA1B	P35368	520 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	CDH6	P55285	790 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	TAS2R40	P59535	323 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	ETF1	P62495	437 aa	Known RBP	12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	SCAP	Q12770	1279 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	USP4	Q13107	963 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	AAK1	Q2M2I8	961 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	LEXM	Q3ZCV2	418 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	RAB6C	Q53S08	254 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	PPP6R3	Q5H9R7	873 aa	Predicted RBP	12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	KCNT1	Q5JUK3	1230 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	LRRC31	Q6UY01	552 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	CPNE8	Q86YQ8	564 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	DENND1C	Q8IV53	801 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	BPIFB1	Q8TDL5	484 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	ZNF592	Q92610	1267 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	USP13	Q92995	863 aa	Predicted RBP	12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	HAPLN3	Q96S86	360 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	PEBP4	Q96S96	227 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	MYADM	Q96S97	322 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	EPAS1	Q99814	870 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	SIK2	Q9H0K1	926 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	RAB6C	Q9H0N0	254 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	THG1L	Q9NWX6	298 aa	Known RBP	12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	OBP2A	Q9NY56	170 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658	TBC1D14	Q9P2M4	693 aa		12.32	□□□□□ -0.44
DDB1-223	ENST00000543658		H3BRJ5	948 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	ENC1	O14682	589 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	DAPK3	O43293	454 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	CREB3	O43889	395 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	PAGE1	O75459	146 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	CYBB	P04839	570 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	RARA	P10276	462 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	LAMP2	P13473	410 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	TCF4	P15884	667 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	IL1R2	P27930	398 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	CHKA	P35790	457 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	IFNAR2	P48551	515 aa		12.31	□□□□□ -0.44
DDB1-223	ENST00000543658	ZNF135	P52742	658 aa	Predicted RBP	12.31	□□□□□ -0.44

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