RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 CYB561D2O14569 222 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 SYN3O14994 580 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 OPA1O60313 960 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 HUS1O60921 280 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 N4BP1O75113 896 aaKnown RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 CAVIN2O95810 425 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 CST3P01034 146 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 TPM2P07951 284 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 CTSAP10619 480 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 ODC1P11926 461 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 IGFBP6P24592 240 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 TKTP29401 623 aaKnown RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 ATICP31939 592 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 PIK3CAP42336 1068 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 RECQLP46063 649 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 MXI1P50539 228 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 MYL6P60660 151 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 RPS26P62854 115 aaKnown RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 MYL5Q02045 173 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 DSG1Q02413 1049 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 CREMQ03060 361 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 PPP3CAQ08209 521 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 CETN1Q12798 172 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 CAMK1Q14012 370 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 ADGRE1Q14246 886 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 SGSM1Q2NKQ1 1148 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 ZACNQ401N2 412 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 HSP90AA4PQ58FG1 418 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 C1orf220Q5T0J3 134 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 CD300LGQ6UXG3 332 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 GALNT5Q7Z7M9 940 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 METTL23Q86XA0 190 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 RNF168Q8IYW5 571 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 AGGF1Q8N302 714 aaeCLIP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 NKAIN3Q8N8D7 197 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 MRPL43Q8N983 215 aaKnown RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 KCT2Q8NC54 265 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 ANKRD20A12PQ8NF67 263 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 SLC35G2Q8TBE7 412 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 GRIN3AQ8TCU5 1115 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 FRS2Q8WU20 508 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 AUTS2Q8WXX7 1259 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 RIN2Q8WYP3 895 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 SLC35C1Q96A29 364 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 HSPBAP1Q96EW2 488 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 B3GALT6Q96L58 329 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 SENP8Q96LD8 212 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 BPIFA3Q9BQP9 254 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 FUCA2Q9BTY2 467 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 IMPG2Q9BZV3 1241 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 NSUN3Q9H649 340 aaKnown RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 VPS45Q9NRW7 570 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 NDOR1Q9UHB4 597 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 DSEQ9UL01 958 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 CYP8B1Q9UNU6 501 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 MTCH2Q9Y6C9 303 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 RALGAPA2Q2PPJ7 1873 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 C2orf71A6NGG8 1288 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 KCNJ18B7U540 433 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 M0QZQ0 153 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 TOR1BO14657 336 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 NCAM2O15394 837 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 PCDHGA12O60330 932 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 EFEMP2O95967 443 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 HLA-DRAP01903 254 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 AFPP02771 609 aaKnown RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 P4HA1P13674 534 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 KLRC2P26717 231 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 AARSP49588 968 aaKnown RBP eCLIP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 TNNC1P63316 161 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 TPM4P67936 248 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 NRG1Q02297 640 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 KCNJ12Q14500 433 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 NCAPHQ15003 741 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 LLGL1Q15334 1064 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 PTPN14Q15678 1187 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 PSMD5Q16401 504 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 ZNF699Q32M78 642 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 WDR72Q3MJ13 1102 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 RTP2Q5QGT7 225 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 PRSS55Q6UWB4 352 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 UNC5AQ6ZN44 842 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 C15orf39Q6ZRI6 1047 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 RBM23Q86U06 439 aaKnown RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 MYLK4Q86YV6 388 aaPredicted RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 TRIM59Q8IWR1 403 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 GPR65Q8IYL9 337 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 AOPEPQ8N6M6 819 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 FBXL13Q8NEE6 735 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 TAF4BQ92750 862 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 CCDC138Q96M89 665 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 MMS19Q96T76 1030 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 MENTQ9BUN1 341 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 WDR12Q9GZL7 423 aaKnown RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 TSPY26PQ9H489 355 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 CCDC86Q9H6F5 360 aaKnown RBP5.41□□□□□ -1.54
CLIP1-217ENST00000543205 TLE6Q9H808 572 aa5.41□□□□□ -1.54
CLIP1-217ENST00000543205 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms