RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ZNF143P52747 638 aaPredicted RBP17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 STARD6P59095 220 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 ATP11AP98196 1134 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 ADGRF1Q5T601 910 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 C1orf228Q6PIY5 440 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 SND1Q7KZF4 910 aaKnown RBP eCLIP17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 TMEM25Q86YD3 366 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 TMTC1Q8IUR5 882 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 CCDC170Q8IYT3 715 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 ATP6V0D2Q8N8Y2 350 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 CENPIQ92674 756 aaPredicted RBP17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 RNF34Q969K3 372 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 BTN2A3PQ96KV6 586 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 SLC12A6Q9UHW9 1150 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 CUL9Q8IWT3 2517 aa17.77■□□□□ 0.44
RABGGTA-203ENST00000543002 TMEM191CA6NGB0 347 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 SHISA7A6NL88 538 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 MAN2B1O00754 1011 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 CYP1A2P05177 515 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 H2AFZP0C0S5 128 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 ADH5P11766 374 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 RDXP35241 583 aaKnown RBP17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 GSDMDP57764 484 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 AMPD2Q01433 879 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 GAD2Q05329 585 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 MTA1Q13330 715 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 C15orf59Q2T9L4 293 aaPredicted RBP17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 GAB4Q2WGN9 574 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 BRMS1LQ5PSV4 323 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 H2AFVQ71UI9 128 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 STRADAQ7RTN6 431 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 CHFRQ96EP1 664 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 DDX50Q9BQ39 737 aaKnown RBP17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 CNPY3Q9BT09 278 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 MARK1Q9P0L2 795 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 PAXBP1Q9Y5B6 917 aa17.76■□□□□ 0.43
RABGGTA-203ENST00000543002 GFRA2O00451 464 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 HOXC11O43248 304 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 LCA5LO95447 670 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 MOCS2O96007 188 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 CYLC1P35663 651 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 ATXN1P54253 815 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 VCPP55072 806 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 OGDHQ02218 1023 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 CDO1Q16878 200 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 FAM133BQ5BKY9 247 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 C10orf76Q5T2E6 689 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 SH3PXD2AQ5TCZ1 1133 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 NADSYN1Q6IA69 706 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 ZNF852Q6ZMS4 543 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 TPGS1Q6ZTW0 290 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 FNIP1Q8TF40 1166 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 CTNNBL1Q8WYA6 563 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 FAM3CQ92520 227 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 ARHGEF26Q96DR7 871 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 BAG1Q99933 345 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 PACSIN1Q9BY11 444 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 IRX2Q9BZI1 471 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 WDCPQ9H6R7 721 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 ARHGEF38Q9NXL2 777 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 XPO7Q9UIA9 1087 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 F5P12259 2224 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 MUC3AQ02505 3323 aa17.75■□□□□ 0.43
RABGGTA-203ENST00000543002 GOLGA6L7A0A1B0GV03 622 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 CCP110O43303 1012 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 TMEM253P0C7T8 217 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 DESP17661 470 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 HDAC4P56524 1084 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 ANO4Q32M45 955 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 RAB6CQ53S08 254 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 TXNDC11Q6PKC3 985 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 BMP8AQ7Z5Y6 402 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 TMEM139Q8IV31 216 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 FAM172AQ8WUF8 416 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 BBS2Q9BXC9 721 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 TKTL2Q9H0I9 626 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 RAB6CQ9H0N0 254 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 MFSD1Q9H3U5 465 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 TBC1D17Q9HA65 648 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 MRPS17Q9Y2R5 130 aaKnown RBP17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 COL4A3Q01955 1670 aa17.74■□□□□ 0.43
RABGGTA-203ENST00000543002 KANSL1LA0AUZ9 987 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 SOWAHDA6NJG2 315 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 TRDMT1O14717 391 aaKnown RBP17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 PDGFBP01127 241 aaPredicted RBP17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 PENKP01210 267 aaPredicted RBP17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 CYBBP04839 570 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 CD72P21854 359 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 PSMA2P25787 234 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 SLC6A4P31645 630 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 OPRD1P41143 372 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 EIF2DP41214 584 aaKnown RBP17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 ZNF252P-AS1Q0IIN9 211 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 MPPE1Q53F39 396 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 FYB2Q5VWT5 728 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 FAM131BQ86XD5 332 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 EXOC4Q96A65 974 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 NELL2Q99435 816 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 NUP85Q9BW27 656 aa17.73■□□□□ 0.43
RABGGTA-203ENST00000543002 TRIM7Q9C029 511 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms