RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 FAM183BPQ6ZVS7 135 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 SLC26A9Q7LBE3 791 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 ZNF677Q86XU0 584 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 ZDHHC17Q8IUH5 632 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 CCDC33Q8N5R6 958 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 ZNF397Q8NF99 534 aaPredicted RBP16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 NEK11Q8NG66 645 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 ADAM32Q8TC27 787 aa16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 RTN4Q9NQC3 1192 aaKnown RBP16.08■□□□□ 0.16
ECHDC2-223ENST00000542552 IRAK2O43187 625 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 TEX33O43247 280 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 ACSL4O60488 711 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 HSF2BPO75031 334 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 KLF8O95600 359 aaPredicted RBP16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 APBB3O95704 486 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 TRUB2O95900 331 aaKnown RBP16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 MMEP08473 750 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 HNRNPLP14866 589 aaKnown RBP eCLIP16.07■□□□□ 0.164e-8■■□□□ 11.8
ECHDC2-223ENST00000542552 CHRNB2P17787 502 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 HOXD9P28356 352 aaPredicted RBP16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 SLC11A2P49281 568 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 PITX1P78337 314 aaPredicted RBP16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 CDR2Q01850 454 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 SLC6A3Q01959 620 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 CRY1Q16526 586 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 MPPE1Q53F39 396 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 TAF3Q5VWG9 929 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 NADSYN1Q6IA69 706 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 OR6B2Q6IFH4 312 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 TMEM92Q6UXU6 159 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 DEFB106AQ8N104 65 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 TXNDC5Q8NBS9 432 aaKnown RBP16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 DDI1Q8WTU0 396 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 SLC20A1Q8WUM9 679 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 HHIPQ96QV1 700 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 CLEC4EQ9ULY5 219 aa16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 SMG5Q9UPR3 1016 aaKnown RBP16.07■□□□□ 0.16
ECHDC2-223ENST00000542552 GOLGA6L7A0A1B0GV03 622 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 TSPAN3O60637 253 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 SLC6A4P31645 630 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 SCNN1AP37088 669 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 STAT1P42224 750 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 DGKEP52429 567 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 NOMO3P69849 1222 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 FMO1Q01740 532 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 SRSF5Q13243 272 aaKnown RBP16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 DCAF6Q58WW2 860 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 EOGTQ5NDL2 527 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 MPP7Q5T2T1 576 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 PIK3R6Q5UE93 754 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 TRMT11Q7Z4G4 463 aaKnown RBP16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 RASSF3Q86WH2 238 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 ZNF513Q8N8E2 541 aaPredicted RBP16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 IPO4Q8TEX9 1081 aaKnown RBP16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 C18orf8Q96DM3 657 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 TMA16Q96EY4 203 aaKnown RBP16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 PCMTD1Q96MG8 357 aaPredicted RBP16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 SPAG5Q96R06 1193 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 PDCL3Q9H2J4 239 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 ZDHHC4Q9NPG8 344 aa16.06■□□□□ 0.16
ECHDC2-223ENST00000542552 AXIN1O15169 862 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 DAB1O75553 588 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 GRAP2O75791 330 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 CYP1A1P04798 512 aaPredicted RBP16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 SGSHP51688 502 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 CDK17Q00537 523 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 GEN1Q17RS7 908 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 SKOR2Q2VWA4 1001 aaPredicted RBP16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 ZC3H12AQ5D1E8 599 aaKnown RBP16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 EGFLAMQ63HQ2 1017 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 RFWD3Q6PCD5 774 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 KIAA0907Q7Z7F0 614 aaPredicted RBP16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 ERICH1Q86X53 443 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 XYLT1Q86Y38 959 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 TSTD1Q8NFU3 115 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 GAB3Q8WWW8 586 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 RUBCNQ92622 972 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 SYNCQ9H7C4 482 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 CBX8Q9HC52 389 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 CD248Q9HCU0 757 aa16.05■□□□□ 0.16
ECHDC2-223ENST00000542552 A0A1B0GTH6 734 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 KCNU1A8MYU2 1149 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 CAVIN2O95810 425 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 NTSR1P30989 418 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 NOS2P35228 1153 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 MATKP42679 507 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 SIM2Q14190 667 aaPredicted RBP16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 ZSCAN23Q3MJ62 389 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 OTUD1Q5VV17 481 aaPredicted RBP16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 NAA35Q5VZE5 725 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 CPA5Q8WXQ8 436 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 NT5C3BQ969T7 300 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 MYEOVQ96EZ4 313 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 BTN2A3PQ96KV6 586 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 NAP1L5Q96NT1 182 aaPredicted RBP16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 ACOX2Q99424 681 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 GABRG3Q99928 467 aa16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 DDX50Q9BQ39 737 aaKnown RBP16.04■□□□□ 0.16
ECHDC2-223ENST00000542552 ADAM33Q9BZ11 813 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms