RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 CD248Q9HCU0 757 aa17.1■□□□□ 0.33
CCND1-205ENST00000542367 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
CCND1-205ENST00000542367 MBD1Q9UIS9 605 aaPredicted RBP17.1■□□□□ 0.33
CCND1-205ENST00000542367 DNAJC12Q9UKB3 198 aa17.1■□□□□ 0.33
CCND1-205ENST00000542367 NAALADL1Q9UQQ1 740 aa17.1■□□□□ 0.33
CCND1-205ENST00000542367 STON1Q9Y6Q2 735 aa17.1■□□□□ 0.33
CCND1-205ENST00000542367 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 GOLGA6L7A0A1B0GV03 622 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 MED19A0JLT2 244 aaPredicted RBP17.09■□□□□ 0.33
CCND1-205ENST00000542367 E5RJQ4 531 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 PAPSS1O43252 624 aaPredicted RBP17.09■□□□□ 0.33
CCND1-205ENST00000542367 SART1O43290 800 aaKnown RBP17.09■□□□□ 0.33
CCND1-205ENST00000542367 HOXD9P28356 352 aaPredicted RBP17.09■□□□□ 0.33
CCND1-205ENST00000542367 ZNF445P59923 1031 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 RING1Q06587 406 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 MIIPQ5JXC2 388 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 NUGGCQ68CJ6 796 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 TCEAL6Q6IPX3 200 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 LPCAT2Q7L5N7 544 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 TMEM110Q86TL2 294 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 TMEFF1Q8IYR6 380 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 DQX1Q8TE96 717 aaKnown RBP17.09■□□□□ 0.33
CCND1-205ENST00000542367 TCEAL3Q969E4 200 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 TUBGCP2Q9BSJ2 902 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 ELOVL2Q9NXB9 296 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 CALCOCO1Q9P1Z2 691 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 THAP10Q9P2Z0 257 aaPredicted RBP17.09■□□□□ 0.33
CCND1-205ENST00000542367 AJAP1Q9UKB5 411 aaPredicted RBP17.09■□□□□ 0.33
CCND1-205ENST00000542367 NUP205Q92621 2012 aa17.09■□□□□ 0.33
CCND1-205ENST00000542367 NPC1O15118 1278 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 ACSL4O60488 711 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 NDUFV2P19404 249 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 IL12RB1P42701 662 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 SLC11A2P49281 568 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 PTK2Q05397 1052 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 SYPL2Q5VXT5 272 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 TMEM215Q68D42 235 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 RFWD3Q6PCD5 774 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 CYP2U1Q7Z449 544 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 WDTC1Q8N5D0 677 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 ADAM32Q8TC27 787 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 PIGKQ92643 395 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 AZIN2Q96A70 460 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 CIPCQ9C0C6 399 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 SLC6A17Q9H1V8 727 aa17.08■□□□□ 0.32
CCND1-205ENST00000542367 SAMSN1Q9NSI8 373 aaKnown RBP17.08■□□□□ 0.32
CCND1-205ENST00000542367 FOXN3O00409 490 aaPredicted RBP17.07■□□□□ 0.32
CCND1-205ENST00000542367 CAPN9O14815 690 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 TIMM44O43615 452 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 HLA-FP30511 346 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 SLC6A4P31645 630 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 SGSHP51688 502 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 LIMK1P53667 647 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 PDCLQ13371 301 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 ZNF234Q14588 700 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 STARD3Q14849 445 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 EIF4HQ15056 248 aaKnown RBP17.07■□□□□ 0.32
CCND1-205ENST00000542367 FAM133BQ5BKY9 247 aaKnown RBP17.07■□□□□ 0.32
CCND1-205ENST00000542367 CT47A1Q5JQC4 288 aaPredicted RBP17.07■□□□□ 0.32
CCND1-205ENST00000542367 PIK3R6Q5UE93 754 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 BEND5Q7L4P6 421 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 ARMCX6Q7L4S7 300 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 SORCS1Q8WY21 1168 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 FCRL2Q96LA5 508 aaPredicted RBP17.07■□□□□ 0.32
CCND1-205ENST00000542367 MRGPRX1Q96LB2 322 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 SERPINB11Q96P15 392 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 TRIM62Q9BVG3 475 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 TJP2Q9UDY2 1190 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 PCDHGC3Q9UN70 934 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 TLR6Q9Y2C9 796 aa17.07■□□□□ 0.32
CCND1-205ENST00000542367 PLXND1Q9Y4D7 1925 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 PATE3B3GLJ2 98 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 KCNJ18B7U540 433 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 PES1O00541 588 aaKnown RBP17.06■□□□□ 0.32
CCND1-205ENST00000542367 KHNYNO15037 678 aaKnown RBP17.06■□□□□ 0.32
CCND1-205ENST00000542367 IRAK2O43187 625 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 TBL1XO60907 577 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 ZNF217O75362 1048 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 PNMA6AP0CW24 399 aaPredicted RBP17.06■□□□□ 0.32
CCND1-205ENST00000542367 CLCN1P35523 988 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 PTGER3P43115 390 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 YWHAZP63104 245 aaKnown RBP17.06■□□□□ 0.32
CCND1-205ENST00000542367 ARID5AQ03989 594 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 KCNMA1Q12791 1236 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 ENPP2Q13822 863 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 KCNJ12Q14500 433 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 E2F5Q15329 346 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 FUT11Q495W5 492 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 SPDYCQ5MJ68 293 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 STPG1Q5TH74 334 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 IL31Q6EBC2 164 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 NADSYN1Q6IA69 706 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 DPY19L2P1Q6NXN4 242 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 SLC36A4Q6YBV0 504 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 TAC4Q86UU9 113 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 PASD1Q8IV76 773 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 DEFB119Q8N690 84 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 GPT2Q8TD30 523 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 SLC39A13Q96H72 371 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 PPP1R13BQ96KQ4 1090 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms