RNA–Protein interactions for RNA: ENST00000542174.5

CDK2AP1-205, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-205ENST00000542174 ATP2C2O75185 946 aa15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 UBOX5O94941 541 aa15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 APRTP07741 180 aa15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 AMPD1P23109 780 aa15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 SARNPP82979 210 aaKnown RBP15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 BNIP1Q12981 228 aa15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 SEPT7Q16181 437 aaKnown RBP15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 LGSNQ5TDP6 509 aa15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 TTC39BQ5VTQ0 682 aaPredicted RBP15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 HEATR6Q6AI08 1181 aaKnown RBP15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 CYS1Q717R9 158 aa15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 AGGF1Q8N302 714 aaeCLIP15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 TFB1MQ8WVM0 346 aaKnown RBP15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 SENP8Q96LD8 212 aa15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 KLC4Q9NSK0 619 aa15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 GRID1Q9ULK0 1009 aa15.27■□□□□ 0.03
CDK2AP1-205ENST00000542174 C9IYK1 514 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 FAM200BP0CF97 657 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 MLNP12872 115 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 RPL9P32969 192 aaKnown RBP15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 NKX3-2P78367 333 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 DNAJC3Q13217 504 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 DCAF6Q58WW2 860 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 OTUD1Q5VV17 481 aaPredicted RBP15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 CLEC20AQ6ZU45 233 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 SH2D5Q6ZV89 423 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 LRRC6Q86X45 466 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 SIX6OS1Q8N1H7 587 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 ZNF398Q8TD17 642 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 ZNF75CPQ92670 426 aaPredicted RBP15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 WNT8BQ93098 351 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 FAM149B1Q96BN6 582 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 FERMT1Q9BQL6 677 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 UPF3AQ9H1J1 476 aaKnown RBP15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 C11orf49Q9H6J7 331 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 FAM105AQ9NUU6 356 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 GIT1Q9Y2X7 761 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 USH1CQ9Y6N9 552 aa15.26■□□□□ 0.03
CDK2AP1-205ENST00000542174 A0A0A0MRY4 1105 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 AVILO75366 819 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 STK10O94804 968 aaKnown RBP15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 METTL18O95568 372 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 APOEP02649 317 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 THP07101 528 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 DHRS4L1P0CG22 281 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 GOT1P17174 413 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 SKIV2L2P42285 1042 aaKnown RBP15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 NEK3P51956 506 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 MRPL10Q7Z7H8 261 aaKnown RBP15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 CHSY1Q86X52 802 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 CCDC63Q8NA47 563 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 GSTCDQ8NEC7 633 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 TCP10LQ8TDR4 215 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 HTR3CQ8WXA8 447 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 NTAN1Q96AB6 310 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 APOPT1Q96IL0 206 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 SIGLEC10Q96LC7 697 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 ZFP42Q96MM3 310 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 SPATA13Q96N96 652 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 EBNA1BP2Q99848 306 aaKnown RBP15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 MED10Q9BTT4 135 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 EIF2B3Q9NR50 452 aaKnown RBP15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 ARHGEF4Q9NR80 690 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 DDX43Q9NXZ2 648 aaKnown RBP15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 RRN3Q9NYV6 651 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 ST3GAL5Q9UNP4 418 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 RAD54BQ9Y620 910 aa15.25■□□□□ 0.03
CDK2AP1-205ENST00000542174 CLDN5O00501 218 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 OPHN1O60890 802 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 KRT37O76014 449 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 BEST1O76090 585 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 SNRPAP09012 282 aaKnown RBP15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 C6orf222P0C671 652 aaPredicted RBP15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 ALDH3A1P30838 453 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 GLUD2P49448 558 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 FAAP100Q0VG06 881 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 SF3A3Q12874 501 aaKnown RBP eCLIP15.24■□□□□ 0.036e-6■□□□□ 10.9
CDK2AP1-205ENST00000542174 PAFAH1B3Q15102 231 aaKnown RBP15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 PDK1Q15118 436 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 PRKD1Q15139 912 aaPredicted RBP15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 FAM133BQ5BKY9 247 aaKnown RBP15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 MDH1BQ5I0G3 518 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 FAXCQ5TGI0 409 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 FAM47EQ6ZV65 393 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 ZNF534Q76KX8 674 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 FAM131BQ86XD5 332 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 ZNF276Q8N554 614 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 RNF139Q8WU17 664 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 DPF3Q92784 378 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 MTBPQ96DY7 904 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 CFAP36Q96G28 342 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 CRTAC1Q9NQ79 661 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 CNGB3Q9NQW8 809 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 CDH9Q9ULB4 789 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 PTPRDP23468 1912 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 LPXNO60711 386 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 MAP3K6O95382 1288 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 PAX3P23760 479 aa15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 ACAT1P24752 427 aaKnown RBP15.24■□□□□ 0.03
CDK2AP1-205ENST00000542174 HCAR3P49019 387 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms