RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 LHX1P48742 406 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 MFAP3P55082 362 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 NCKAP1LP55160 1127 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 CYP4F2P78329 520 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 FOXK1P85037 733 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 SFMBT2Q5VUG0 894 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 TMEM215Q68D42 235 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 ADALQ6DHV7 355 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 CRELD2Q6UXH1 353 aaPredicted RBP10.28□□□□□ -0.76
CHFR-220ENST00000541817 SERPINA13PQ6UXR4 307 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 HTR3DQ70Z44 454 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 SPATS2Q86XZ4 545 aaKnown RBP10.28□□□□□ -0.76
CHFR-220ENST00000541817 C1orf127Q8N9H9 656 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 NSUN7Q8NE18 718 aaKnown RBP10.28□□□□□ -0.76
CHFR-220ENST00000541817 OR2T3Q8NH03 318 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 KBTBD7Q8WVZ9 684 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 CCNL2Q96S94 520 aaPredicted RBP10.28□□□□□ -0.76
CHFR-220ENST00000541817 CIPCQ9C0C6 399 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 ZNF518BQ9C0D4 1074 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 TNMDQ9H2S6 317 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
CHFR-220ENST00000541817 ZKSCAN5Q9Y2L8 839 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 KIF26BQ2KJY2 2108 aa10.28□□□□□ -0.76
CHFR-220ENST00000541817 ICE1Q9Y2F5 2266 aa10.27□□□□□ -0.76
CHFR-220ENST00000541817 A0A1B0GVM2 712 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 A0A1W2PPC4 97 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 K7ENM7 598 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 MDM4O15151 490 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 ZNF500O60304 480 aaPredicted RBP10.27□□□□□ -0.77
CHFR-220ENST00000541817 CDKL5O76039 1030 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 PIGRP01833 764 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 GUCY2CP25092 1073 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 PNPLA4P41247 253 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 ARRB1P49407 418 aaPredicted RBP10.27□□□□□ -0.77
CHFR-220ENST00000541817 RPS14P62263 151 aaKnown RBP10.27□□□□□ -0.77
CHFR-220ENST00000541817 SKOR1P84550 965 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 TGIF1Q15583 401 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 SASS6Q6UVJ0 657 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 NUP93Q8N1F7 819 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 GANCQ8TET4 914 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 CYB5D2Q8WUJ1 264 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 ATXN7L3BQ96GX2 97 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 PRR11Q96HE9 360 aaPredicted RBP10.27□□□□□ -0.77
CHFR-220ENST00000541817 C8orf48Q96LL4 319 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 SLC46A1Q96NT5 459 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 KCNK16Q96T55 309 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 FUCA2Q9BTY2 467 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 KLF16Q9BXK1 252 aaPredicted RBP10.27□□□□□ -0.77
CHFR-220ENST00000541817 MTG2Q9H4K7 406 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 ELOVL2Q9NXB9 296 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 EHD2Q9NZN4 543 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 MARK1Q9P0L2 795 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 FBXO10Q9UK96 956 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 NUDT5Q9UKK9 219 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 AGO2Q9UKV8 859 aaKnown RBP10.27□□□□□ -0.77
CHFR-220ENST00000541817 CDH9Q9ULB4 789 aa10.27□□□□□ -0.77
CHFR-220ENST00000541817 USP9YO00507 2555 aaPredicted RBP10.27□□□□□ -0.77
CHFR-220ENST00000541817 TDRD6O60522 2096 aaKnown RBP10.27□□□□□ -0.77
CHFR-220ENST00000541817 GOLGA6L6A8MZA4 724 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 CASC3O15234 703 aaKnown RBP10.26□□□□□ -0.77
CHFR-220ENST00000541817 FFAR2O15552 330 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 CYP26A1O43174 497 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 ADCY5O95622 1261 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 KCNJ12Q14500 433 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 CLCA4Q14CN2 919 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 TBR1Q16650 682 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 FAM173BQ6P4H8 233 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 NCEH1Q6PIU2 408 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 TOP6BLQ8N6T0 577 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 UCMAQ8WVF2 138 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 SGF29Q96ES7 293 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 PHF12Q96QT6 1004 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 DPEP3Q9H4B8 488 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 CLSTN2Q9H4D0 955 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 GDAP2Q9NXN4 497 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 SERGEFQ9UGK8 458 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 SIX4Q9UIU6 781 aa10.26□□□□□ -0.77
CHFR-220ENST00000541817 TLR4O00206 839 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 PPFIA2O75334 1257 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 DNTTP04053 509 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 TPM2P07951 284 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 COL8A1P27658 744 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.77
CHFR-220ENST00000541817 ZNF132P52740 706 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 GALCP54803 685 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 NXPH1P58417 271 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 GRIN1Q05586 938 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 CAMK2GQ13555 558 aaPredicted RBP10.25□□□□□ -0.77
CHFR-220ENST00000541817 NCAPHQ15003 741 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 ISXQ2M1V0 245 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 FNDC3BQ53EP0 1204 aaKnown RBP10.25□□□□□ -0.77
CHFR-220ENST00000541817 ARSHQ5FYA8 562 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 ZNF787Q6DD87 383 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 MYCT1Q8N699 235 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 C4orf32Q8N8J7 132 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 RBBP8NLQ8NC74 664 aaPredicted RBP10.25□□□□□ -0.77
CHFR-220ENST00000541817 CXorf38Q8TB03 319 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 MYCBPAPQ8TBZ2 947 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 SKA1Q96BD8 255 aa10.25□□□□□ -0.77
CHFR-220ENST00000541817 PIWIL1Q96J94 861 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms