RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 RNF8O76064 485 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 OLFM2O95897 454 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 IRF1P10914 325 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 MSNP26038 577 aaKnown RBP9.71□□□□□ -0.86
DDX55-208ENST00000541259 GBP1P32455 592 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 MAN1A1P33908 653 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 RDXP35241 583 aaKnown RBP9.71□□□□□ -0.86
DDX55-208ENST00000541259 GJC1P36383 396 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 MARCKSL1P49006 195 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 CXCR3P49682 368 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 KCNQ1P51787 676 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 SLC25A11Q02978 314 aaKnown RBP9.71□□□□□ -0.86
DDX55-208ENST00000541259 ACAP1Q15027 740 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 TRIP4Q15650 581 aaPredicted RBP9.71□□□□□ -0.86
DDX55-208ENST00000541259 ARHGAP15Q53QZ3 475 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 ATAT1Q5SQI0 421 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 MEI1Q5TIA1 1274 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 CES5AQ6NT32 575 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 KLHDC10Q6PID8 442 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 THSD4Q6ZMP0 1018 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 GET4Q7L5D6 327 aaPredicted RBP9.71□□□□□ -0.86
DDX55-208ENST00000541259 PEX26Q7Z412 305 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 FAM131BQ86XD5 332 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 CCDC185Q8N715 623 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 ST13P5Q8NFI4 369 aaPredicted RBP9.71□□□□□ -0.86
DDX55-208ENST00000541259 TRIM58Q8NG06 486 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.71□□□□□ -0.86
DDX55-208ENST00000541259 ADAMTS19Q8TE59 1207 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 KRT35Q92764 455 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 CD101Q93033 1021 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 ACSF2Q96CM8 615 aaPredicted RBP9.71□□□□□ -0.86
DDX55-208ENST00000541259 SLC39A13Q96H72 371 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 CALR3Q96L12 384 aaKnown RBP9.71□□□□□ -0.86
DDX55-208ENST00000541259 C16orf45Q96MC5 204 aaPredicted RBP9.71□□□□□ -0.86
DDX55-208ENST00000541259 NACA2Q9H009 215 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 TASP1Q9H6P5 420 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 UBE2ZQ9H832 354 aaPredicted RBP9.71□□□□□ -0.86
DDX55-208ENST00000541259 GPATCH2LQ9NWQ4 482 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 CD207Q9UJ71 328 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 DNMT3LQ9UJW3 386 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 AMFRQ9UKV5 643 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 USP18Q9UMW8 372 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 CCL26Q9Y258 94 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 TLR6Q9Y2C9 796 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 SNX10Q9Y5X0 201 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 CLUHO75153 1309 aa9.71□□□□□ -0.86
DDX55-208ENST00000541259 TRAV19A0A0A6YYK7 116 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 ESPNB1AK53 854 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 ENC1O14682 589 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 SCAMP3O14828 347 aaKnown RBP9.7□□□□□ -0.86
DDX55-208ENST00000541259 DDX3YO15523 660 aaKnown RBP9.7□□□□□ -0.86
DDX55-208ENST00000541259 PRAMEF12O95522 483 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 F9P00740 461 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 ATP1A1P05023 1023 aaKnown RBP9.7□□□□□ -0.86
DDX55-208ENST00000541259 KCNA5P22460 613 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 DDX6P26196 483 aaKnown RBP eCLIP9.7□□□□□ -0.86
DDX55-208ENST00000541259 ADRA1BP35368 520 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 PCK1P35558 622 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 SLC1A1P43005 524 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 DNA2P51530 1060 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 TBX4P57082 545 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 SLC7A9P82251 487 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 CA9Q16790 459 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 SMTNL2Q2TAL5 461 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 KCNT1Q5JUK3 1230 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 SYT10Q6XYQ8 523 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 TADA2BQ86TJ2 420 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 NPAS3Q8IXF0 933 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 CMTM8Q8IZV2 173 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 SYCE1Q8N0S2 351 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 SMRP1Q8NCR6 262 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 TTC16Q8NEE8 873 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 RIN3Q8TB24 985 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 FGF13Q92913 245 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 RNF34Q969K3 372 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 RIPOR3Q96MK2 946 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 SERPINB11Q96P15 392 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 ALS2CR12Q96Q35 445 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 MYADMQ96S97 322 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 CDK5RAP1Q96SZ6 601 aaKnown RBP9.7□□□□□ -0.86
DDX55-208ENST00000541259 TLR10Q9BXR5 811 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 TKTL2Q9H0I9 626 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 POMKQ9H5K3 350 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 SLITRK6Q9H5Y7 841 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 WDCPQ9H6R7 721 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 KLHL11Q9NVR0 708 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 XPO7Q9UIA9 1087 aaKnown RBP9.7□□□□□ -0.86
DDX55-208ENST00000541259 LCMT1Q9UIC8 334 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 FZD10Q9ULW2 581 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 USP15Q9Y4E8 981 aaPredicted RBP9.7□□□□□ -0.86
DDX55-208ENST00000541259 CPQQ9Y646 472 aa9.7□□□□□ -0.86
DDX55-208ENST00000541259 KCNU1A8MYU2 1149 aa9.69□□□□□ -0.86
DDX55-208ENST00000541259 LEFTY2O00292 366 aa9.69□□□□□ -0.86
DDX55-208ENST00000541259 PRPSAP2O60256 369 aa9.69□□□□□ -0.86
DDX55-208ENST00000541259 GREM1O60565 184 aa9.69□□□□□ -0.86
DDX55-208ENST00000541259 STC2O76061 302 aa9.69□□□□□ -0.86
DDX55-208ENST00000541259 MOCS2O96007 188 aaPredicted RBP9.69□□□□□ -0.86
DDX55-208ENST00000541259 IGLV3-27P01718 113 aa9.69□□□□□ -0.86
DDX55-208ENST00000541259 KLKB1P03952 638 aa9.69□□□□□ -0.86
DDX55-208ENST00000541259 CKMP06732 381 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms