RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 FBXO22Q8NEZ5 403 aa12.7□□□□□ -0.38
AP003559.1-201ENST00000540906 GIPC2Q8TF65 315 aa12.7□□□□□ -0.38
AP003559.1-201ENST00000540906 OLFM3Q96PB7 478 aa12.7□□□□□ -0.38
AP003559.1-201ENST00000540906 SLC9A7Q96T83 725 aa12.7□□□□□ -0.38
AP003559.1-201ENST00000540906 CLSTN3Q9BQT9 956 aa12.7□□□□□ -0.38
AP003559.1-201ENST00000540906 TMBIM4Q9HC24 238 aa12.7□□□□□ -0.38
AP003559.1-201ENST00000540906 NINJ2Q9NZG7 142 aa12.7□□□□□ -0.38
AP003559.1-201ENST00000540906 MTRRQ9UBK8 725 aa12.7□□□□□ -0.38
AP003559.1-201ENST00000540906 SCML2Q9UQR0 700 aa12.7□□□□□ -0.38
AP003559.1-201ENST00000540906 ABHD14A-ACY1A0A1B0GW23 586 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 BCLAF3A2AJT9 711 aaKnown RBP12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 H3BRJ5 948 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 EEF2KO00418 725 aaKnown RBP12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 TRIM66O15016 1216 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 SEC24AO95486 1093 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 TBX18O95935 607 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 ARL4AP40617 200 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 ALDH7A1P49419 539 aaKnown RBP12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 GPS2Q13227 327 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 KYNUQ16719 465 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 MGAT5BQ3V5L5 792 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 MSS51Q4VC12 460 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 HSP90B2PQ58FF3 399 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 RASIP1Q5U651 963 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 OTOP2Q7RTS6 562 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 NECAB2Q7Z6G3 386 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 SLC39A11Q8N1S5 342 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 NAT8LQ8N9F0 302 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 CCDC110Q8TBZ0 833 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 AUTS2Q8WXX7 1259 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 RTP4Q96DX8 246 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 C9orf72Q96LT7 481 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 QKIQ96PU8 341 aaKnown RBP eCLIP12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 LGMNQ99538 433 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 FAM129AQ9BZQ8 928 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 SMOC2Q9H3U7 446 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 WDCPQ9H6R7 721 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 RCOR3Q9P2K3 495 aaPredicted RBP12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 ACSL3O95573 720 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 NUDT17P0C025 328 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 RAG1P15918 1043 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 ERCC2P18074 760 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 OR1D2P34982 312 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 ELAVL2Q12926 359 aaKnown RBP12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 PSMD5Q16401 504 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 SLC45A4Q5BKX6 768 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 FNBP1LQ5T0N5 605 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 MFSD5Q6N075 450 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 ANKS3Q6ZW76 656 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 BEND5Q7L4P6 421 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 RUFY1Q96T51 708 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 ABCC13Q9NSE7 274 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 ARHGEF38Q9NXL2 777 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 RRN3Q9NYV6 651 aa12.69□□□□□ -0.38
AP003559.1-201ENST00000540906 FAM92AA1XBS5 289 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 F5H423 210 aaPredicted RBP12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 H7C4K7 107 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 LRIG2O94898 1065 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 F9P00740 461 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 CAV1Q03135 178 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 PPARDQ03181 441 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 TAF10Q12962 218 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 SLMAPQ14BN4 828 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 USP41Q3LFD5 358 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 SPDYCQ5MJ68 293 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 SPOUT1Q5T280 376 aaKnown RBP12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 FAM43BQ6ZT52 329 aaPredicted RBP12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 CCDC13Q8IYE1 715 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 COLGALT1Q8NBJ5 622 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 BBOF1Q8ND07 529 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 SPPL2BQ8TCT7 592 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 CCHCR1Q8TD31 782 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 EPS8L3Q8TE67 593 aaKnown RBP12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 DEPDC1BQ8WUY9 529 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 RBM15Q96T37 977 aaKnown RBP eCLIP12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 CEP41Q9BYV8 373 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 SAYSD1Q9NPB0 183 aa12.68□□□□□ -0.38
AP003559.1-201ENST00000540906 OPA1O60313 960 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 METTL18O95568 372 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 TPI1P60174 286 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 BASP1P80723 227 aaKnown RBP12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 BTG3Q14201 252 aaPredicted RBP12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 KCNJ11Q14654 390 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 MORF4L2Q15014 288 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 PAFAH1B3Q15102 231 aaKnown RBP12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 DENND2CQ68D51 928 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 SLC8B1Q6J4K2 584 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 DENND5BQ6ZUT9 1274 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 C14orf80Q86SX3 495 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 AGGF1Q8N302 714 aaeCLIP12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 RNF34Q969K3 372 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 FBXO32Q969P5 355 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 KLC2Q9H0B6 622 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 SIK2Q9H0K1 926 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 OR12D3Q9UGF7 316 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 SMIM23A6NLE4 172 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 SLC38A8A6NNN8 435 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 KCNU1A8MYU2 1149 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 GOLGA8KD6RF30 607 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms