RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 STOML2Q9UJZ1 356 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 CLEC4EQ9ULY5 219 aa12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 HBS1LQ9Y450 684 aaKnown RBP12.56□□□□□ -0.4
CBX3P4-202ENST00000540428 CETN3O15182 167 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 BCAT2O15382 392 aaPredicted RBP12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 CBFA2T3O75081 653 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 CER1O95813 267 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 CAPNS1P04632 268 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 EPHX1P07099 455 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 FTH1P19P0C7X4 201 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 EPB41P11171 864 aaKnown RBP12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 PRKCHP24723 683 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 HARS2P49590 506 aaKnown RBP12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 BCAT1P54687 386 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 ARID5AQ03989 594 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 CAMK2GQ13555 558 aaPredicted RBP12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 TMEM215Q68D42 235 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 SERPINA13PQ6UXR4 307 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 BHLHA9Q7RTU4 235 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 SCML4Q8N228 414 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 OR2T3Q8NH03 318 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 CCDC34Q96HJ3 373 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 CAMK1GQ96NX5 476 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 ARID3AQ99856 593 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 IRX2Q9BZI1 471 aaPredicted RBP12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 ULBP1Q9BZM6 244 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 SCAND2PQ9GZW5 306 aaPredicted RBP12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 FBRSQ9HAH7 460 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 TSPAN16Q9UKR8 245 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 APOBEC2Q9Y235 224 aaKnown RBP12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 COQ4Q9Y3A0 265 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 PCDHGB2Q9Y5G2 931 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 MYH10P35580 1976 aa12.55□□□□□ -0.4
CBX3P4-202ENST00000540428 CEP192Q8TEP8 1941 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 ASPMQ8IZT6 3477 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 HOXD9P28356 352 aaPredicted RBP12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 MATKP42679 507 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 YWHAEP62258 255 aaKnown RBP12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 BST2Q10589 180 aaKnown RBP12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 SGO2Q562F6 1265 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 DBX2Q6ZNG2 339 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 PROSER1Q86XN7 944 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 FMNL3Q8IVF7 1028 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 C1orf216Q8TAB5 229 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 RNF139Q8WU17 664 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 KCTD13Q8WZ19 329 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 TATDN2Q93075 761 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 MIR1-1HGQ9H1L0 117 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 TMEM245Q9H330 911 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 GAREM1Q9H706 876 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 LRRC4Q9HBW1 653 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 OSGEPQ9NPF4 335 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 TM7SF3Q9NS93 570 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 KIAA1522Q9P206 1035 aaPredicted RBP12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 HESX1Q9UBX0 185 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 PCOLCE2Q9UKZ9 415 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 PLA2G4CQ9UP65 541 aa12.54□□□□□ -0.4
CBX3P4-202ENST00000540428 SLC16A3O15427 465 aaKnown RBP12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 ZNF202O95125 648 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 SETSIPP0DME0 302 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 HLA-FP30511 346 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 ZBTB16Q05516 673 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 RING1Q06587 406 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 ADIGQ0VDE8 80 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 CUL2Q13617 745 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 GOLGA7BQ2TAP0 167 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 CBWD6Q4V339 395 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 COBLL1Q53SF7 1204 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 CBWD3Q5JTY5 395 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 CBWD5Q5RIA9 395 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 MPP7Q5T2T1 576 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 ADGRF1Q5T601 910 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 BSPRYQ5W0U4 402 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 LRSAM1Q6UWE0 723 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 CCNI2Q6ZMN8 369 aaPredicted RBP12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 KIAA0907Q7Z7F0 614 aaPredicted RBP12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 AHI1Q8N157 1196 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 ZNF557Q8N988 423 aaPredicted RBP12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 SPRYD3Q8NCJ5 442 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 SORCS1Q8WY21 1168 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 TMA16Q96EY4 203 aaKnown RBP12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 IPO9Q96P70 1041 aaKnown RBP12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 LHX5Q9H2C1 402 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 CNGB3Q9NQW8 809 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 ABCC13Q9NSE7 274 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 RMND1Q9NWS8 449 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 EIF2B4Q9UI10 523 aaKnown RBP12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 KIAA1257Q9ULG3 409 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 ZDHHC9Q9Y397 364 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 ATP6V1DQ9Y5K8 247 aa12.53□□□□□ -0.4
CBX3P4-202ENST00000540428 ADAMTS9Q9P2N4 1935 aa12.52□□□□□ -0.4
CBX3P4-202ENST00000540428 YJEFN3A6XGL0 299 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 E7ENQ6 273 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 TAF4O00268 1085 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 TULP2O00295 520 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 FLRT2O43155 660 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 VDRP11473 427 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 TBXAS1P24557 533 aaPredicted RBP12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 AFF3P51826 1226 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms