RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TTYH3Q9C0H2 523 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 ZSCAN32Q9NX65 697 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 CALCOCO1Q9P1Z2 691 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 GOLGA6L19H0YKK7 550 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 DAB1O75553 588 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 UNGP13051 313 aaPredicted RBP19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 TFE3P19532 575 aaPredicted RBP19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 TIE1P35590 1138 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 PBX1P40424 430 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 DGKGP49619 791 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 RNASE9P60153 205 aaKnown RBP19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 CDK17Q00537 523 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 C10orf76Q5T2E6 689 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 OTUD1Q5VV17 481 aaPredicted RBP19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 E4F1Q66K89 784 aaPredicted RBP19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 LRSAM1Q6UWE0 723 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 MMS22LQ6ZRQ5 1243 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 ZDHHC17Q8IUH5 632 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 ALLCQ8N6M5 410 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 IL17RCQ8NAC3 791 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 DDI1Q8WTU0 396 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 AZIN2Q96A70 460 aa19.02■□□□□ 0.64
SNRPA1-203ENST00000540017 USP34Q70CQ2 3546 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 SYNJ2BP-COX16A0A087WUM0 186 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 LRRC53A6NM62 1247 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 GOLGA8SH3BPF8 625 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 MOCS2O96007 188 aaPredicted RBP19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 CYBBP04839 570 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 FERP16591 822 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 MMP8P22894 467 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 HOXD9P28356 352 aaPredicted RBP19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 PXNP49023 591 aaPredicted RBP19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 SLC11A2P49281 568 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 FNTBP49356 437 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 UBASH3AP57075 661 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 MRPS21P82921 87 aaKnown RBP19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 PTP4A2Q12974 167 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 DMC1Q14565 340 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 PPP2R5DQ14738 602 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 CLEC16AQ2KHT3 1053 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 MPPE1Q53F39 396 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 FAM102AQ5T9C2 384 aaPredicted RBP19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 HEATR6Q6AI08 1181 aaKnown RBP19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 TRNP1Q6NT89 227 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 SYT13Q7L8C5 426 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 PHLDB2Q86SQ0 1253 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 TMA16Q96EY4 203 aaKnown RBP19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 AGPAT1Q99943 283 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 SYT11Q9BT88 431 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 TSPY26PQ9H489 355 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 FAM204AQ9H8W3 233 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 DDIT4Q9NX09 232 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 COX16Q9P0S2 106 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 MYO6Q9UM54 1294 aa19.01■□□□□ 0.63
SNRPA1-203ENST00000540017 SGK1O00141 431 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 LILRB5O75023 590 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 KLF8O95600 359 aaPredicted RBP19■□□□□ 0.63
SNRPA1-203ENST00000540017 HNRNPLP14866 589 aaKnown RBP eCLIP19■□□□□ 0.63
SNRPA1-203ENST00000540017 NOS2P35228 1153 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 FLT3P36888 993 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 SCNN1AP37088 669 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 MATKP42679 507 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 MRE11P49959 708 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 GEN1Q17RS7 908 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 PIK3R6Q5UE93 754 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 TRIM72Q6ZMU5 477 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 ASCL5Q7RTU5 278 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 ALYREFQ86V81 257 aaKnown RBP19■□□□□ 0.63
SNRPA1-203ENST00000540017 TXNDC5Q8NBS9 432 aaKnown RBP19■□□□□ 0.63
SNRPA1-203ENST00000540017 PRICKLE1Q96MT3 831 aaPredicted RBP19■□□□□ 0.63
SNRPA1-203ENST00000540017 HHIPQ96QV1 700 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 NPY6RQ99463 290 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 C11orf70Q9BRQ4 267 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 FAM126AQ9BYI3 521 aaPredicted RBP19■□□□□ 0.63
SNRPA1-203ENST00000540017 NUCKS1Q9H1E3 243 aaKnown RBP19■□□□□ 0.63
SNRPA1-203ENST00000540017 IFNKQ9P0W0 207 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 TMEM59LQ9UK28 342 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 MMP17Q9ULZ9 603 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 SLC8A2Q9UPR5 921 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 SLC27A6Q9Y2P4 619 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 PCDHGA2Q9Y5H1 932 aa19■□□□□ 0.63
SNRPA1-203ENST00000540017 M0QYT0 321 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 ADAM23O75077 832 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 HOXA6P31267 233 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 CENPCQ03188 943 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 PREPLQ4J6C6 727 aaPredicted RBP18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 EGFLAMQ63HQ2 1017 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 RNF43Q68DV7 783 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 TMEM92Q6UXU6 159 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 CCDC26Q8TAB7 109 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 WFDC5Q8TCV5 224 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 ATRIPQ8WXE1 791 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 NT5C3BQ969T7 300 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 ACDQ96AP0 544 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 ACOX2Q99424 681 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 STARD13Q9Y3M8 1113 aa18.99■□□□□ 0.63
SNRPA1-203ENST00000540017 KCNU1A8MYU2 1149 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 TBL1XO60907 577 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms