RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 KCNMA1Q12791 1236 aa13□□□□□ -0.33
DDX55-206ENST00000539934 ZNF124Q15973 351 aa13□□□□□ -0.33
DDX55-206ENST00000539934 MEA1Q16626 185 aa13□□□□□ -0.33
DDX55-206ENST00000539934 ZNF792Q3KQV3 632 aa13□□□□□ -0.33
DDX55-206ENST00000539934 DCAF17Q5H9S7 520 aaPredicted RBP13□□□□□ -0.33
DDX55-206ENST00000539934 C1orf53Q5VUE5 145 aa13□□□□□ -0.33
DDX55-206ENST00000539934 USP43Q70EL4 1123 aa13□□□□□ -0.33
DDX55-206ENST00000539934 AKAP14Q86UN6 197 aa13□□□□□ -0.33
DDX55-206ENST00000539934 RASSF3Q86WH2 238 aa13□□□□□ -0.33
DDX55-206ENST00000539934 ANKS4BQ8N8V4 417 aa13□□□□□ -0.33
DDX55-206ENST00000539934 HSPH1Q92598 858 aa13□□□□□ -0.33
DDX55-206ENST00000539934 COX4I2Q96KJ9 171 aa13□□□□□ -0.33
DDX55-206ENST00000539934 CNDP1Q96KN2 507 aa13□□□□□ -0.33
DDX55-206ENST00000539934 TSNARE1Q96NA8 513 aa13□□□□□ -0.33
DDX55-206ENST00000539934 NEURL2Q9BR09 285 aa13□□□□□ -0.33
DDX55-206ENST00000539934 EHD1Q9H4M9 534 aa13□□□□□ -0.33
DDX55-206ENST00000539934 HAUS4Q9H6D7 363 aa13□□□□□ -0.33
DDX55-206ENST00000539934 CXXC1Q9P0U4 656 aaPredicted RBP13□□□□□ -0.33
DDX55-206ENST00000539934 TNFRSF10DQ9UBN6 386 aa13□□□□□ -0.33
DDX55-206ENST00000539934 SNX8Q9Y5X2 465 aa13□□□□□ -0.33
DDX55-206ENST00000539934 PIEZO1Q92508 2521 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 ALOX15BO15296 676 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 SLC25A27O95847 323 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 RHOXF2BP0C7M4 288 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 PLS3P13797 630 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 CYLC1P35663 651 aaPredicted RBP12.99□□□□□ -0.33
DDX55-206ENST00000539934 CASP4P49662 377 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 KCNQ1P51787 676 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 ACLYP53396 1101 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 ACTR2P61160 394 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 RPS3AP61247 264 aaKnown RBP12.99□□□□□ -0.33
DDX55-206ENST00000539934 ROR1Q01973 937 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 SWSAP1Q6NVH7 229 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 CRTC1Q6UUV9 634 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 IKBIPQ70UQ0 350 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 RBBP8NLQ8NC74 664 aaPredicted RBP12.99□□□□□ -0.33
DDX55-206ENST00000539934 RUBCNQ92622 972 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 TNIP3Q96KP6 325 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 GAL3ST1Q99999 423 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 RHOXF2Q9BQY4 288 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 LSM14BQ9BX40 385 aaKnown RBP12.99□□□□□ -0.33
DDX55-206ENST00000539934 IKZF4Q9H2S9 585 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 METTL5Q9NRN9 209 aaKnown RBP12.99□□□□□ -0.33
DDX55-206ENST00000539934 GIN1Q9NXP7 522 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 SELENONQ9NZV5 590 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 SAMD15Q9P1V8 674 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 USP20Q9Y2K6 914 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 IFT52Q9Y366 437 aa12.99□□□□□ -0.33
DDX55-206ENST00000539934 FAM170AA1A519 330 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 FUOMA2VDF0 154 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 GMNCA6NCL1 334 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 DCDC2CA8MYV0 355 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 E7EVH7 732 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 PI4K2BG5E9Z4 385 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 BPNT1O95861 308 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 AFPP02771 609 aaKnown RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 MAPTP10636 758 aaKnown RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 MYOGP15173 224 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 HPGDP15428 266 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 ZNF135P52742 658 aaPredicted RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 RABGGTBP53611 331 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 ALCAMQ13740 583 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 KCNA10Q16322 511 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 NFIL3Q16649 462 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 PPP6R3Q5H9R7 873 aaPredicted RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 TMEM240Q5SV17 173 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 FAM102BQ5T8I3 360 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 RRAGAQ7L523 313 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 ATXN2LQ8WWM7 1075 aaKnown RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 REXO5Q96IC2 774 aaKnown RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 CEP170P1Q96L14 293 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 VPS35Q96QK1 796 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 MMP19Q99542 508 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 TINF2Q9BSI4 451 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 DDX18Q9NVP1 670 aaKnown RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.98□□□□□ -0.33
DDX55-206ENST00000539934 MALT1Q9UDY8 824 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 ANGPTL3Q9Y5C1 460 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 A8MX80 341 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 NDUFA2O43678 99 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 DAB1O75553 588 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 GSTM1P09488 218 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 MYZAPP0CAP1 466 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 ICAM3P32942 547 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 EIF2B2P49770 351 aaKnown RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 CDK7P50613 346 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 BCAP31P51572 246 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 IST1P53990 364 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 PEX3P56589 373 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 VBP1P61758 197 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 MRPS5P82675 430 aaKnown RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 OR7E24Q6IFN5 339 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 IDO2Q6ZQW0 420 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 USP51Q70EK9 711 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 CYFIP1Q7L576 1253 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 TBC1D1Q86TI0 1168 aaPredicted RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 CCDC60Q8IWA6 550 aaPredicted RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 RAVER1Q8IY67 606 aaKnown RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 ATP6V0D2Q8N8Y2 350 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 PDZD8Q8NEN9 1154 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms