RNA–Protein interactions for RNA: ENST00000539885.1

NCAPD2-209, Transcript of non-SMC condensin I complex subunit D2, human

TSL 3

Gene NCAPD2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD2-209	ENST00000539885	EBF1	Q9UH73	591 aa		11.71	□□□□□ -0.53
NCAPD2-209	ENST00000539885	NOCT	Q9UK39	431 aa	Known RBP	11.71	□□□□□ -0.53
NCAPD2-209	ENST00000539885	MYO6	Q9UM54	1294 aa		11.71	□□□□□ -0.53
NCAPD2-209	ENST00000539885	NAALADL1	Q9UQQ1	740 aa		11.71	□□□□□ -0.53
NCAPD2-209	ENST00000539885	FAM186A	A6NE01	2351 aa		11.71	□□□□□ -0.54
NCAPD2-209	ENST00000539885	CACNA1I	Q9P0X4	2223 aa		11.71	□□□□□ -0.54
NCAPD2-209	ENST00000539885	RIF1	Q5UIP0	2472 aa	Known RBP	11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	SYCE3	A1L190	88 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	TYW5	A2RUC4	315 aa	Known RBP	11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	EPHB6	O15197	1021 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	ACSL4	O60488	711 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	DAB1	O75553	588 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	GFPT2	O94808	682 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	TRUB2	O95900	331 aa	Known RBP	11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	ERBB2	P04626	1255 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	CISD3	P0C7P0	127 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	CCDC172	P0C7W6	258 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	GBP1	P32455	592 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	FNTB	P49356	437 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	KLK7	P49862	253 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	SEC13	P55735	322 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	CDR2	Q01850	454 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	SLC6A3	Q01959	620 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	MESP2	Q0VG99	397 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	IQCB1	Q15051	598 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	CRY1	Q16526	586 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	ZSCAN23	Q3MJ62	389 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	C2orf27A	Q580R0	203 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	SYPL2	Q5VXT5	272 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	OR6B2	Q6IFH4	312 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	FAM183BP	Q6ZVS7	135 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	ANKS1B	Q7Z6G8	1248 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	DDI1	Q8WTU0	396 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	FCRL2	Q96LA5	508 aa	Predicted RBP	11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	NLRC4	Q9NPP4	1024 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	RTN4	Q9NQC3	1192 aa	Known RBP	11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	RAB23	Q9ULC3	237 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	SMG5	Q9UPR3	1016 aa	Known RBP	11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885	KIAA1549L	Q6ZVL6	1849 aa		11.7	□□□□□ -0.54
NCAPD2-209	ENST00000539885		A0A1B0GTH6	734 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885		A0A1W2PQC6	194 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	AXIN1	O15169	862 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	ALDH1A2	O94788	518 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	KLF8	O95600	359 aa	Predicted RBP	11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.69	□□□□□ -0.54	2e-6	■□□□□ 10.6
NCAPD2-209	ENST00000539885	HOXD9	P28356	352 aa	Predicted RBP	11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	NOMO3	P69849	1222 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	DCAF6	Q58WW2	860 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	FAM133B	Q5BKY9	247 aa	Known RBP	11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	TAF3	Q5VWG9	929 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	LAIR1	Q6GTX8	287 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	ARC	Q7LC44	396 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	CACNA2D4	Q7Z3S7	1137 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	C11orf74	Q86VG3	221 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	RASSF3	Q86WH2	238 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	ERICH1	Q86X53	443 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	ALLC	Q8N6M5	410 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	HJURP	Q8NCD3	748 aa	Predicted RBP	11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	WFIKKN2	Q8TEU8	576 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	UCMA	Q8WVF2	138 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	GAB3	Q8WWW8	586 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	RUBCN	Q92622	972 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	BHMT	Q93088	406 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	C18orf8	Q96DM3	657 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	TMA16	Q96EY4	203 aa	Known RBP	11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	PIWIL1	Q96J94	861 aa	Known RBP	11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	BTN2A3P	Q96KV6	586 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	HHIP	Q96QV1	700 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	FAM204A	Q9H8W3	233 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	POLM	Q9NP87	494 aa	Predicted RBP	11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	PLK2	Q9NYY3	685 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	TJP2	Q9UDY2	1190 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	SLC12A6	Q9UHW9	1150 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	STAP1	Q9ULZ2	295 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	PAXBP1	Q9Y5B6	917 aa		11.69	□□□□□ -0.54
NCAPD2-209	ENST00000539885	ATRX	P46100	2492 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	TPR	P12270	2363 aa	Known RBP	11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	TIMM44	O43615	452 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	CYP1A1	P04798	512 aa	Predicted RBP	11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	MME	P08473	750 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	FER	P16591	822 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	NTSR1	P30989	418 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	CCR1	P32246	355 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	NOS2	P35228	1153 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	TIE1	P35590	1138 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	MATK	P42679	507 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	DMWD	Q09019	674 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	TAF5	Q15542	800 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	PIK3R6	Q5UE93	754 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	HEATR6	Q6AI08	1181 aa	Known RBP	11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	SDE2	Q6IQ49	451 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	PPP1R2P3	Q6NXS1	205 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	XYLT1	Q86Y38	959 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	SFTPA1	Q8IWL2	248 aa		11.68	□□□□□ -0.54
NCAPD2-209	ENST00000539885	DEFB106A	Q8N104	65 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms