RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 TRIM66O15016 1216 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 DGKIO75912 1065 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 HPDP32754 393 aaPredicted RBP23.21■■□□□ 1.31
HOMER3-204ENST00000539827 ELAVL2Q12926 359 aaKnown RBP23.21■■□□□ 1.31
HOMER3-204ENST00000539827 PDIA2Q13087 525 aaKnown RBP23.21■■□□□ 1.31
HOMER3-204ENST00000539827 FNBP1LQ5T0N5 605 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 PRSS55Q6UWB4 352 aaPredicted RBP23.21■■□□□ 1.31
HOMER3-204ENST00000539827 CENPUQ71F23 418 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 CCDC110Q8TBZ0 833 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 TMEM109Q9BVC6 243 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 TRIM62Q9BVG3 475 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.21■■□□□ 1.31
HOMER3-204ENST00000539827 MYO16Q9Y6X6 1858 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.21■■□□□ 1.31
HOMER3-204ENST00000539827 RASGRF2O14827 1237 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 TPI1P60174 286 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 PPARDQ03181 441 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 SEMA3BQ13214 749 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 LONRF1Q17RB8 773 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 FAXCQ5TGI0 409 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 BEND5Q7L4P6 421 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 CCDC13Q8IYE1 715 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 DNAJC5GQ8N7S2 189 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 RAB6BQ9NRW1 208 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 PCDH10Q9P2E7 1040 aa23.21■■□□□ 1.31
HOMER3-204ENST00000539827 DCLK1O15075 740 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 CLTBP09497 229 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 ERCC2P18074 760 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 MAGEA11P43364 429 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 MAGOHP61326 146 aaKnown RBP23.2■■□□□ 1.3
HOMER3-204ENST00000539827 USP46P62068 366 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 C6orf118Q5T5N4 469 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 KDM7AQ6ZMT4 941 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 RNF19BQ6ZMZ0 732 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 ANKMY2Q8IV38 441 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 ZBED8Q8IZ13 594 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 CASP10Q92851 521 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 OLFM3Q96PB7 478 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 TTPALQ9BTX7 342 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 PRDM16Q9HAZ2 1276 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 MTMR11A4FU01 709 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 H7C4K7 107 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 ALOX15BO15296 676 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 RGS16O15492 202 aaPredicted RBP23.2■■□□□ 1.3
HOMER3-204ENST00000539827 TBC1D4O60343 1298 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 IGLV3-25P01717 112 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 VAV1P15498 845 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 ARL4CP56559 192 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 MTM1Q13496 603 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 HIF1AQ16665 826 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 LRRC26Q2I0M4 334 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 MSS51Q4VC12 460 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 TP53INP2Q8IXH6 220 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 TFB1MQ8WVM0 346 aaKnown RBP23.2■■□□□ 1.3
HOMER3-204ENST00000539827 PAWRQ96IZ0 340 aaKnown RBP23.2■■□□□ 1.3
HOMER3-204ENST00000539827 LGMNQ99538 433 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 CWH43Q9H720 699 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 OSER1Q9NX31 292 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 SCML2Q9UQR0 700 aa23.2■■□□□ 1.3
HOMER3-204ENST00000539827 IRAK2O43187 625 aa23.19■■□□□ 1.3
HOMER3-204ENST00000539827 MSI1O43347 362 aaKnown RBP23.19■■□□□ 1.3
HOMER3-204ENST00000539827 VNN2O95498 520 aa23.19■■□□□ 1.3
HOMER3-204ENST00000539827 SKOR1P84550 965 aa23.19■■□□□ 1.3
HOMER3-204ENST00000539827 KCNJ11Q14654 390 aa23.19■■□□□ 1.3
HOMER3-204ENST00000539827 PAFAH1B3Q15102 231 aaKnown RBP23.19■■□□□ 1.3
HOMER3-204ENST00000539827 TTC19Q6DKK2 380 aaPredicted RBP23.19■■□□□ 1.3
HOMER3-204ENST00000539827 FBXO46Q6PJ61 603 aaPredicted RBP23.19■■□□□ 1.3
HOMER3-204ENST00000539827 CAPN12Q6ZSI9 719 aa23.19■■□□□ 1.3
HOMER3-204ENST00000539827 TMCO2Q7Z6W1 182 aaPredicted RBP23.19■■□□□ 1.3
HOMER3-204ENST00000539827 TLCD1Q96CP7 247 aa23.19■■□□□ 1.3
HOMER3-204ENST00000539827 ROPN1BQ9BZX4 212 aaPredicted RBP23.19■■□□□ 1.3
HOMER3-204ENST00000539827 CRISPLD1Q9H336 500 aa23.19■■□□□ 1.3
HOMER3-204ENST00000539827 ROPN1Q9HAT0 212 aaPredicted RBP23.19■■□□□ 1.3
HOMER3-204ENST00000539827 ALDH7A1P49419 539 aaKnown RBP23.18■■□□□ 1.3
HOMER3-204ENST00000539827 GPR17Q13304 367 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 AUHQ13825 339 aaKnown RBP23.18■■□□□ 1.3
HOMER3-204ENST00000539827 MGAT5BQ3V5L5 792 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 HEATR6Q6AI08 1181 aaKnown RBP23.18■■□□□ 1.3
HOMER3-204ENST00000539827 FAM117BQ6P1L5 589 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 BZW1Q7L1Q6 419 aaKnown RBP23.18■■□□□ 1.3
HOMER3-204ENST00000539827 SEPT5Q99719 369 aaPredicted RBP23.18■■□□□ 1.3
HOMER3-204ENST00000539827 C11orf49Q9H6J7 331 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 GMIPQ9P107 970 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 OR12D3Q9UGF7 316 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 HACD1B0YJ81 288 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 IFI35P80217 286 aaPredicted RBP23.18■■□□□ 1.3
HOMER3-204ENST00000539827 EIF4EBP2Q13542 120 aaPredicted RBP23.18■■□□□ 1.3
HOMER3-204ENST00000539827 ANKS3Q6ZW76 656 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 CROCCP2Q86T23 111 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 PGM2Q96G03 612 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 SMOC2Q9H3U7 446 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 FBXO44Q9H4M3 255 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 ETNK1Q9HBU6 452 aa23.18■■□□□ 1.3
HOMER3-204ENST00000539827 GCATO75600 419 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 CAPN2P17655 700 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 GJA8P48165 433 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 HCAR3P49019 387 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 AP1B1Q10567 949 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 BBS9Q3SYG4 887 aa23.17■■□□□ 1.3
HOMER3-204ENST00000539827 HTR3CQ8WXA8 447 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms