RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 XPO7Q9UIA9 1087 aaKnown RBP13.21□□□□□ -0.29
TSPAN9-207ENST00000539631 TECTAO75443 2155 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 CCP110O43303 1012 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 TSPAN3O60637 253 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 ENDOD1O94919 500 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 LATS1O95835 1130 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 ADH1CP00326 375 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 ADH5P11766 374 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 GLULP15104 373 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 FECHP22830 423 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 SLC6A4P31645 630 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 CCR1P32246 355 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 RDXP35241 583 aaKnown RBP13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 CHKAP35790 457 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 PTPN9P43378 593 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 SLC11A2P49281 568 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 CXCR3P49682 368 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 MLLT6P55198 1093 aaPredicted RBP13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 GAD2Q05329 585 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 ANO4Q32M45 955 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 NAIF1Q69YI7 327 aaPredicted RBP13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 NADSYN1Q6IA69 706 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 TXNDC11Q6PKC3 985 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 RALGPS2Q86X27 583 aaPredicted RBP13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 FAM217AQ8IXS0 508 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 CPXM2Q8N436 756 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 ATP6V0D2Q8N8Y2 350 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 FAM3CQ92520 227 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 AZIN2Q96A70 460 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 P2RY11Q96G91 374 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 SHDQ96IW2 340 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 TRIM7Q9C029 511 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 MFSD1Q9H3U5 465 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 TBC1D17Q9HA65 648 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 C11orf16Q9NQ32 467 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 ANLNQ9NQW6 1124 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 STOML2Q9UJZ1 356 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 SCINQ9Y6U3 715 aa13.2□□□□□ -0.3
TSPAN9-207ENST00000539631 ANKRD62A6NC57 917 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 TMEM191CA6NGB0 347 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 SOWAHDA6NJG2 315 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 KCNU1A8MYU2 1149 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 STK25O00506 426 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 HOXC11O43248 304 aaPredicted RBP13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 F9P00740 461 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 CYP1A2P05177 515 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 SLC2A3P11169 496 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 OPRD1P41143 372 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 SLC6A11P48066 632 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 ZNF143P52747 638 aaPredicted RBP13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 PPP2R5DQ14738 602 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 PON2Q15165 354 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 FAM133BQ5BKY9 247 aaKnown RBP13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 ADGRF1Q5T601 910 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 RAP1GAP2Q684P5 730 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 CWF19L1Q69YN2 538 aaKnown RBP13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 RFWD3Q6PCD5 774 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 SND1Q7KZF4 910 aaKnown RBP eCLIP13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 STRADAQ7RTN6 431 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 C12orf40Q86WS4 652 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 NAT16Q8N8M0 369 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 FLCNQ8NFG4 579 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 FAM172AQ8WUF8 416 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 CENPIQ92674 756 aaPredicted RBP13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 BHMTQ93088 406 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 MSANTD3Q96H12 275 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 BTN2A3PQ96KV6 586 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 BBS2Q9BXC9 721 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 FOXQ1Q9C009 403 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 TKTL2Q9H0I9 626 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 WDCPQ9H6R7 721 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 MRPL47Q9HD33 250 aaKnown RBP13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 TMPRSS4Q9NRS4 437 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 ARHGEF38Q9NXL2 777 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 PLK2Q9NYY3 685 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 SLC12A6Q9UHW9 1150 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 NDRG2Q9UN36 371 aaKnown RBP13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 HCN4Q9Y3Q4 1203 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 ARIH1Q9Y4X5 557 aaPredicted RBP13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 TRIOO75962 3097 aa13.19□□□□□ -0.3
TSPAN9-207ENST00000539631 KANSL1LA0AUZ9 987 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 NEDD8-MDP1E9PL57 170 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 I6L893 689 aaPredicted RBP13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 GFRA2O00451 464 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 MAN2B1O00754 1011 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 TYRP14679 529 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 PSMA2P25787 234 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 CYLC1P35663 651 aaPredicted RBP13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 MRE11P49959 708 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 GALK1P51570 392 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 SGSHP51688 502 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 HDAC4P56524 1084 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 AMPD2Q01433 879 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 ZNF252P-AS1Q0IIN9 211 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 UBXN2BQ14CS0 331 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 MPPE1Q53F39 396 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms