RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 SLC39A13Q96H72 371 aa16.3■□□□□ 0.2
CIT-210ENST00000539413 POLMQ9NP87 494 aaPredicted RBP16.3■□□□□ 0.2
CIT-210ENST00000539413 NLRC4Q9NPP4 1024 aa16.3■□□□□ 0.2
CIT-210ENST00000539413 GMEB2Q9UKD1 530 aa16.3■□□□□ 0.2
CIT-210ENST00000539413 TLR6Q9Y2C9 796 aa16.3■□□□□ 0.2
CIT-210ENST00000539413 CEP83Q9Y592 693 aa16.3■□□□□ 0.2
CIT-210ENST00000539413 DCLK1O15075 740 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 GRAP2O75791 330 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 GFPT2O94808 682 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 TRUB2O95900 331 aaKnown RBP16.29■□□□□ 0.2
CIT-210ENST00000539413 IGLV3-25P01717 112 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 ATP1A3P13637 1013 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 HOXB2P14652 356 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 NTSR1P30989 418 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 CDH5P33151 784 aaPredicted RBP16.29■□□□□ 0.2
CIT-210ENST00000539413 SLC11A2P49281 568 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 ZNF445P59923 1031 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 NNTQ13423 1086 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 FAM133BQ5BKY9 247 aaKnown RBP16.29■□□□□ 0.2
CIT-210ENST00000539413 EFHC1Q5JVL4 640 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 RFWD3Q6PCD5 774 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 OLFML1Q6UWY5 402 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 KBTBD6Q86V97 674 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 CHPFQ8IZ52 775 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 TMEM35BQ8NCS4 154 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
CIT-210ENST00000539413 AZIN2Q96A70 460 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 TMA16Q96EY4 203 aaKnown RBP16.29■□□□□ 0.2
CIT-210ENST00000539413 PCMTD1Q96MG8 357 aaPredicted RBP16.29■□□□□ 0.2
CIT-210ENST00000539413 SLC2A11Q9BYW1 496 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 NAT10Q9H0A0 1025 aaKnown RBP16.29■□□□□ 0.2
CIT-210ENST00000539413 ASNSD1Q9NWL6 643 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 INVSQ9Y283 1065 aa16.29■□□□□ 0.2
CIT-210ENST00000539413 PIEZO1Q92508 2521 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 TCRBV21S2A2A0A5A6 115 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 LRRC10BA6NIK2 292 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 IRAK2O43187 625 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 ALDH1A2O94788 518 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 MOCS2O96007 188 aaPredicted RBP16.28■□□□□ 0.2
CIT-210ENST00000539413 GLI1P08151 1106 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 MMEP08473 750 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 JAM2P57087 298 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 SLC6A3Q01959 620 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 UBXN1Q04323 297 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 DCAF6Q58WW2 860 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 PIK3R6Q5UE93 754 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 CACNA2D4Q7Z3S7 1137 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 ANKS1BQ7Z6G8 1248 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 DHX40Q8IX18 779 aaKnown RBP16.28■□□□□ 0.2
CIT-210ENST00000539413 EPS8L1Q8TE68 723 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 MYEOVQ96EZ4 313 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 SLC2A13Q96QE2 648 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 BPIFA3Q9BQP9 254 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 FUCA2Q9BTY2 467 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 SYNCQ9H7C4 482 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 CACNA2D2Q9NY47 1150 aa16.28■□□□□ 0.2
CIT-210ENST00000539413 XPO7Q9UIA9 1087 aaKnown RBP16.28■□□□□ 0.2
CIT-210ENST00000539413 EML5Q05BV3 1969 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 A0A1W2PQF6 199 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 WASH3PC4AMC7 463 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 HSF2BPO75031 334 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 RETP07949 1114 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 TGM1P22735 817 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 SOX5P35711 763 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 SNX16P57768 344 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 SPEM2Q0P670 501 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 EIF4EBP2Q13542 120 aaPredicted RBP16.27■□□□□ 0.2
CIT-210ENST00000539413 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 ZC3H12AQ5D1E8 599 aaKnown RBP16.27■□□□□ 0.2
CIT-210ENST00000539413 SDE2Q6IQ49 451 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 NEK11Q8NG66 645 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 SLC20A1Q8WUM9 679 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 HMGB4Q8WW32 186 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 ERLEC1Q96DZ1 483 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 PRICKLE1Q96MT3 831 aaPredicted RBP16.27■□□□□ 0.2
CIT-210ENST00000539413 GABRG3Q99928 467 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 NUCKS1Q9H1E3 243 aaKnown RBP16.27■□□□□ 0.2
CIT-210ENST00000539413 FAM204AQ9H8W3 233 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 PARD6AQ9NPB6 346 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 BCCIPQ9P287 314 aaKnown RBP eCLIP16.27■□□□□ 0.2
CIT-210ENST00000539413 NOCTQ9UK39 431 aaKnown RBP16.27■□□□□ 0.2
CIT-210ENST00000539413 RAD54BQ9Y620 910 aa16.27■□□□□ 0.2
CIT-210ENST00000539413 FRYLO94915 3013 aa16.27■□□□□ 0.19
CIT-210ENST00000539413 SYNJ2BP-COX16A0A087WUM0 186 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 TBL1XO60907 577 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 DAB1O75553 588 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 APOEP02649 317 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 GABRG2P18507 467 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 HLA-FP30511 346 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 CDK17Q00537 523 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 PLK5Q496M5 336 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 USP39Q53GS9 565 aaKnown RBP16.26■□□□□ 0.19
CIT-210ENST00000539413 C2CD6Q53TS8 623 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 TMEM215Q68D42 235 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 KIAA1211LQ6NV74 962 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 SLC26A9Q7LBE3 791 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 ZDHHC17Q8IUH5 632 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 PGBD3Q8N328 593 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 OLIG1Q8TAK6 271 aa16.26■□□□□ 0.19
CIT-210ENST00000539413 WFDC5Q8TCV5 224 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms