RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TKTL2Q9H0I9 626 aa14.68□□□□□ -0.06
CD4-208ENST00000538827 WDCPQ9H6R7 721 aa14.68□□□□□ -0.06
CD4-208ENST00000538827 WDR6Q9NNW5 1121 aaKnown RBP14.68□□□□□ -0.06
CD4-208ENST00000538827 DNMT3BQ9UBC3 853 aaKnown RBP14.68□□□□□ -0.06
CD4-208ENST00000538827 FZD10Q9ULW2 581 aa14.68□□□□□ -0.06
CD4-208ENST00000538827 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.67□□□□□ -0.06
CD4-208ENST00000538827 PGRMC1O00264 195 aaKnown RBP14.67□□□□□ -0.06
CD4-208ENST00000538827 ZRANB2O95218 330 aaKnown RBP eCLIP14.67□□□□□ -0.06
CD4-208ENST00000538827 FGF19O95750 216 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 OAS1P00973 400 aaKnown RBP14.67□□□□□ -0.06
CD4-208ENST00000538827 CKMP06732 381 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 PRLRP16471 622 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 CCR1P32246 355 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 GGCXP38435 758 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 PAFAH1B1P43034 410 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 CXCR3P49682 368 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 TUBP50607 506 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 TUBB2AQ13885 445 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 LONRF2Q1L5Z9 754 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 PUS10Q3MIT2 529 aaKnown RBP14.67□□□□□ -0.06
CD4-208ENST00000538827 BOLA3Q53S33 107 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 BRMS1LQ5PSV4 323 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 ERMARDQ5T6L9 678 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 GPR158Q5T848 1215 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 SNX30Q5VWJ9 437 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 KAZNQ674X7 775 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 TXNDC8Q6A555 127 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 SPOCD1Q6ZMY3 1216 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 GAREM2Q75VX8 874 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 ADAT2Q7Z6V5 191 aaKnown RBP14.67□□□□□ -0.06
CD4-208ENST00000538827 RFX6Q8HWS3 928 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 LEMD2Q8NC56 503 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 SHKBP1Q8TBC3 707 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 RAPGEF5Q92565 580 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 ZNF707Q96C28 371 aaPredicted RBP14.67□□□□□ -0.06
CD4-208ENST00000538827 KCTD15Q96SI1 283 aaPredicted RBP14.67□□□□□ -0.06
CD4-208ENST00000538827 TUBB2BQ9BVA1 445 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 LRRC3Q9BY71 257 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 SLITRK6Q9H5Y7 841 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 UBE2ZQ9H832 354 aaPredicted RBP14.67□□□□□ -0.06
CD4-208ENST00000538827 SMPD4Q9NXE4 827 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 TLR6Q9Y2C9 796 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 ZDBF2Q9HCK1 2354 aa14.67□□□□□ -0.06
CD4-208ENST00000538827 NOTCH4Q99466 2003 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 TRAV19A0A0A6YYK7 116 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 CES2O00748 559 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 GLP2RO95838 553 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 FGGP02679 453 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 POU2F2P09086 479 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 CD48P09326 243 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 KDELR1P24390 212 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 CCR2P41597 374 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 TEAD2Q15562 447 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 STXBP5Q5T5C0 1151 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 MFSD7Q6UXD7 560 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 RCOR2Q8IZ40 523 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 PYROXD2Q8N2H3 581 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 EFHBQ8N7U6 833 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 ARL14EPQ8N8R7 260 aaPredicted RBP14.66□□□□□ -0.06
CD4-208ENST00000538827 MAB21L3Q8N8X9 362 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 ATP6V0D2Q8N8Y2 350 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 MNS1Q8NEH6 495 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 ING5Q8WYH8 240 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 NTAN1Q96AB6 310 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 TCEAL4Q96EI5 215 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 FCRL2Q96LA5 508 aaPredicted RBP14.66□□□□□ -0.06
CD4-208ENST00000538827 CARD6Q9BX69 1037 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 PCDH18Q9HCL0 1135 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 ANLNQ9NQW6 1124 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 SNX10Q9Y5X0 201 aa14.66□□□□□ -0.06
CD4-208ENST00000538827 NUP210Q8TEM1 1887 aaPredicted RBP14.65□□□□□ -0.06
CD4-208ENST00000538827 hCG_1818297A0A087WSY0 165 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 H3BRJ5 948 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 NRG2O14511 850 aaPredicted RBP14.65□□□□□ -0.06
CD4-208ENST00000538827 CREB3O43889 395 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 SLC2A3P11169 496 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 CEBPBP17676 345 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 ADRA1BP35368 520 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 ARL4AP40617 200 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 KPNA1P52294 538 aaPredicted RBP14.65□□□□□ -0.06
CD4-208ENST00000538827 AIF1P55008 147 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 DYNLT1P63172 113 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 C2orf54Q08AI8 447 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 MMRN1Q13201 1228 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 NNTQ13423 1086 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 PPP2R5DQ14738 602 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 PDK2Q15119 407 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 SLC5A9Q2M3M2 681 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 ANKRD54Q6NXT1 300 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 SLC13A5Q86YT5 568 aaPredicted RBP14.65□□□□□ -0.06
CD4-208ENST00000538827 MAP7D3Q8IWC1 876 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 RASGEF1CQ8N431 466 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 CMASQ8NFW8 434 aaPredicted RBP14.65□□□□□ -0.06
CD4-208ENST00000538827 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.65□□□□□ -0.06
CD4-208ENST00000538827 HEMGNQ9BXL5 484 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 OSBPL8Q9BZF1 889 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 SIK2Q9H0K1 926 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 ARHGEF38Q9NXL2 777 aa14.65□□□□□ -0.06
CD4-208ENST00000538827 MRPS23Q9Y3D9 190 aaKnown RBP14.65□□□□□ -0.06
CD4-208ENST00000538827 HBS1LQ9Y450 684 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms