RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 UBXN6Q9BZV1 441 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ELOVL6Q9H5J4 265 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ARMC7Q9H6L4 198 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 A0A0A6YYK5 440 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ATG7O95352 703 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 MAP3K6O95382 1288 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 MED26O95402 600 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 EGFRP00533 1210 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ACO1P21399 889 aaKnown RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 YWHAQP27348 245 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 HALP42357 657 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 CCNHP51946 323 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 RGS21Q2M5E4 152 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 CCDC153Q494R4 210 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 PEX5LQ8IYB4 626 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 FUKQ8N0W3 1084 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 UTP15Q8TED0 518 aaKnown RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 RUSC1Q9BVN2 902 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 TMEM106CQ9BVX2 250 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 WDR41Q9HAD4 459 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 USP18Q9UMW8 372 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 OGTO15294 1046 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ALOX12P18054 663 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 PPP2R1BP30154 601 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ANTXR2P58335 489 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 MCL1Q07820 350 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ZNF618Q5T7W0 954 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 TAF8Q7Z7C8 310 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 FAM228AQ86W67 206 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 CARNMT1Q8N4J0 409 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 DAGLBQ8NCG7 672 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 EXD1Q8NHP7 514 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 BDH2Q9BUT1 245 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 OSBPL6Q9BZF3 934 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 PIF1Q9H611 641 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 MIEF1Q9NQG6 463 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 RPL10AP62906 217 aaKnown RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 CSNK2BP67870 215 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 MAD2L1Q13257 205 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 PRCCQ92733 491 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 FBXO32Q969P5 355 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 TMEM121Q9BTD3 319 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ADGRE3Q9BY15 652 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 MTMR12Q9C0I1 747 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 ZFYVE28Q9HCC9 887 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 KLHL28Q9NXS3 571 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 CNOT7Q9UIV1 285 aaKnown RBP10.19□□□□□ -0.78
COL4A6-208ENST00000538570 REREQ9P2R6 1566 aa10.19□□□□□ -0.78
COL4A6-208ENST00000538570 C17orf102A2RUQ5 167 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 PIK3CDO00329 1044 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 CYP2B6P20813 491 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 SLC1A6P48664 564 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 ORC1Q13415 861 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 NR6A1Q15406 480 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 CCNG2Q16589 344 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 PAPD7Q5XG87 772 aaKnown RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 CWF19L1Q69YN2 538 aaKnown RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 RIPOR1Q6ZS17 1223 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 NECAB2Q7Z6G3 386 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 ACOT1Q86TX2 421 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 CCDC33Q8N5R6 958 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 TRPC4APQ8TEL6 797 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 FIG4Q92562 907 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 PHACTR1Q9C0D0 580 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 C6orf62Q9GZU0 229 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 TBC1D13Q9NVG8 400 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 KLK14Q9P0G3 267 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 WDR37Q9Y2I8 494 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 TMEM114B3SHH9 223 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 PARNO95453 639 aaKnown RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 SLC2A4P14672 509 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 RXRGP48443 463 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 BCAT1P54687 386 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 ATP13A5Q4VNC0 1218 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 UXS1Q8NBZ7 420 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 RMND5BQ96G75 393 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 ZNF285Q96NJ3 590 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 AP4E1Q9UPM8 1137 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 NDUFB5O43674 189 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 ZBTB7AO95365 584 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 MBL2P11226 248 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 GSTA3Q16772 222 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 ZNF57Q68EA5 555 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 CASP12Q6UXS9 341 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 FAM136AQ96C01 138 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 ACOX2Q99424 681 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 GPATCH2LQ9NWQ4 482 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 TRPC4Q9UBN4 977 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 VTI1BQ9UEU0 232 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 PHGDHO43175 533 aaKnown RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 FBXO21O94952 628 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 ALDH7A1P49419 539 aaKnown RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 MGAT5Q09328 741 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 GRIK3Q13003 919 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 TSNQ15631 228 aaKnown RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 FAAH2Q6GMR7 532 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 SHQ1Q6PI26 577 aaKnown RBP10.18□□□□□ -0.78
COL4A6-208ENST00000538570 MACC1Q6ZN28 852 aa10.18□□□□□ -0.78
COL4A6-208ENST00000538570 TMPRSS6Q8IU80 811 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms