RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TEAD4Q15561 434 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 PPP1R26Q5T8A7 1209 aaPredicted RBP14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 DHRS13Q6UX07 377 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 RBBP8NLQ8NC74 664 aaPredicted RBP14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 KIAA0895Q8NCT3 520 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 OR2T3Q8NH03 318 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 CYB5D2Q8WUJ1 264 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 ZNF396Q96N95 335 aaPredicted RBP14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 DUSP16Q9BY84 665 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 BACH2Q9BYV9 841 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 IMPG2Q9BZV3 1241 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 PCED1AQ9H1Q7 454 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 APOBEC3GQ9HC16 384 aaKnown RBP14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 TM9SF3Q9HD45 589 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 DMAC2Q9NW81 257 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 MARCH2Q9P0N8 246 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 ANKRD6Q9Y2G4 727 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 FLNBO75369 2602 aaKnown RBP14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 PLXNA2O75051 1894 aa14.67□□□□□ -0.06
SMARCA4-206ENST00000538456 SLC12A8A0AV02 714 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 TNFSF14O43557 240 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 TSPAN3O60637 253 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 FSBPO95073 299 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 SEMA4FO95754 770 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 GRK6P43250 576 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 STK4Q13043 487 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 CAMK2BQ13554 666 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 E2F5Q15329 346 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 FOXD4L6Q3SYB3 417 aaPredicted RBP14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 ZNF394Q53GI3 561 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 C1orf220Q5T0J3 134 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 FOXD4L5Q5VV16 416 aaPredicted RBP14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 FOXD4L3Q6VB84 417 aaPredicted RBP14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 SLC9A9Q8IVB4 645 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 ZNF276Q8N554 614 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 TMC2Q8TDI7 906 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 FOXD4L4Q8WXT5 416 aaPredicted RBP14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 BIRC7Q96CA5 298 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 ARID3AQ99856 593 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 NIF3L1Q9GZT8 377 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 MMRN2Q9H8L6 949 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 EXOC1Q9NV70 894 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 STRIP2Q9ULQ0 834 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 USP3Q9Y6I4 520 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 KNTC1P50748 2209 aa14.66□□□□□ -0.06
SMARCA4-206ENST00000538456 H0Y8X5 98 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 YEATS4O95619 227 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 TRIM49P0CI25 452 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 TRIM49CP0CI26 452 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 HOXD9P28356 352 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 GRIA4P48058 902 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 GCLMP48507 274 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 CCT8P50990 548 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 YWHAGP61981 247 aaKnown RBP eCLIP14.65□□□□□ -0.066e-6■□□□□ 9
SMARCA4-206ENST00000538456 CAMK2GQ13555 558 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 SMAD1Q15797 465 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 PTPRNQ16849 979 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 KCNT1Q5JUK3 1230 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 ADAT2Q7Z6V5 191 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 CPXM2Q8N436 756 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 PDCD7Q8N8D1 485 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 PIP4K2CQ8TBX8 421 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 TAS1R2Q8TE23 839 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 IGSF8Q969P0 613 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 SLC2A11Q9BYW1 496 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 KCTD10Q9H3F6 313 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 CYP3A43Q9HB55 503 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 FAM13BQ9NYF5 915 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 FTSJ1Q9UET6 329 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 FRMD4BQ9Y2L6 1034 aa14.65□□□□□ -0.06
SMARCA4-206ENST00000538456 KALRNO60229 2985 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 A0A087WV48 116 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 PLK4O00444 970 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 IKBKBO14920 756 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 TIMM44O43615 452 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 KLRC4O43908 158 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 PRB1P04280 392 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 HLA-FP30511 346 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 ABCG1P45844 678 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 VAMP7P51809 220 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 CLDN6P56747 220 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 SCUBE3Q8IX30 993 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 CEP57L1Q8IYX8 460 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 ARHGAP18Q8N392 663 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 ENGASEQ8NFI3 743 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 PLD4Q96BZ4 506 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 INTS4Q96HW7 963 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 HEXIM2Q96MH2 286 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 DNAI2Q9GZS0 605 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 BTBD1Q9H0C5 482 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 TMEM245Q9H330 911 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 ABCB8Q9NUT2 735 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 PLA2G4CQ9UP65 541 aa14.64□□□□□ -0.07
SMARCA4-206ENST00000538456 PDXKO00764 312 aa14.63□□□□□ -0.07
SMARCA4-206ENST00000538456 PCDHGA12O60330 932 aa14.63□□□□□ -0.07
SMARCA4-206ENST00000538456 DNTTP04053 509 aa14.63□□□□□ -0.07
SMARCA4-206ENST00000538456 CD27P26842 260 aa14.63□□□□□ -0.07
SMARCA4-206ENST00000538456 ME1P48163 572 aa14.63□□□□□ -0.07
SMARCA4-206ENST00000538456 BCAT1P54687 386 aa14.63□□□□□ -0.07
SMARCA4-206ENST00000538456 RPS14P62263 151 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms