RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 DTNBO60941 627 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 DNTTP04053 509 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 UGT1A5P35504 534 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 CDKN3Q16667 212 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 PERM1Q5SV97 790 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 B3GNT8Q7Z7M8 397 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 GALNT11Q8NCW6 608 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 BRF1Q92994 677 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 GRAMD1AQ96CP6 724 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 ABHD17AQ96GS6 310 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 CIPCQ9C0C6 399 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 MAGEC2Q9UBF1 373 aaPredicted RBP10.02□□□□□ -0.81
CPSF7-217ENST00000537162 CA5BQ9Y2D0 317 aa10.02□□□□□ -0.81
CPSF7-217ENST00000537162 RP1P56715 2156 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 ARHGAP10A1A4S6 786 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 CPED1A4D0V7 1026 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 PRR19A6NJB7 356 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 AGRPO00253 132 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 PLD2O14939 933 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 NEBLO76041 1014 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 TBX18O95935 607 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 MAPTP10636 758 aaKnown RBP10.01□□□□□ -0.81
CPSF7-217ENST00000537162 LMO2P25791 158 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 PPP2CBP62714 309 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 PPP2CAP67775 309 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 EIF2S3LQ2VIR3 472 aaKnown RBP10.01□□□□□ -0.81
CPSF7-217ENST00000537162 SV2CQ496J9 727 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 HECTD3Q5T447 861 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 TDRD10Q5VZ19 366 aaKnown RBP10.01□□□□□ -0.81
CPSF7-217ENST00000537162 VSTM1Q6UX27 236 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 ZPBP2Q6X784 338 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 Q6ZUG5 572 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 HEATR4Q86WZ0 1026 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 MFSD2AQ8NA29 543 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 TMEM161BQ8NDZ6 487 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 GANCQ8TET4 914 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 CYB5D2Q8WUJ1 264 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 UCMAQ8WVF2 138 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 JPH3Q8WXH2 748 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-217ENST00000537162 FAM84AQ96KN4 292 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 KLF16Q9BXK1 252 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-217ENST00000537162 NEUROG2Q9H2A3 272 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 TMEM60Q9H2L4 133 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 FOXJ2Q9P0K8 574 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 CPSF3Q9UKF6 684 aaKnown RBP10.01□□□□□ -0.81
CPSF7-217ENST00000537162 RBM19Q9Y4C8 960 aaKnown RBP10.01□□□□□ -0.81
CPSF7-217ENST00000537162 DAAM1Q9Y4D1 1078 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 ANKHD1Q8IWZ3 2542 aaKnown RBP10.01□□□□□ -0.81
CPSF7-217ENST00000537162 SHANK1Q9Y566 2161 aa10.01□□□□□ -0.81
CPSF7-217ENST00000537162 HIVEP3Q5T1R4 2406 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 PRAMEF33A0A0G2JMD5 474 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 A0A1W2PP55 124 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 GABRDO14764 452 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 OGTO15294 1046 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 PRAMEF10O60809 474 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 LDLRP01130 860 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 PENKP01210 267 aaPredicted RBP10□□□□□ -0.81
CPSF7-217ENST00000537162 IGHDP01880 384 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 ANXA13P27216 316 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 CYP27A1Q02318 531 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 EHHADHQ08426 723 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 SSRP1Q08945 709 aaKnown RBP10□□□□□ -0.81
CPSF7-217ENST00000537162 KLRB1Q12918 225 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 STRN3Q13033 797 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 FYB2Q5VWT5 728 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 GALNT17Q6IS24 598 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 SV2AQ7L0J3 742 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 EFL1Q7Z2Z2 1120 aaKnown RBP10□□□□□ -0.81
CPSF7-217ENST00000537162 DTX1Q86Y01 620 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 FBXO39Q8N4B4 442 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 SLITRK1Q96PX8 696 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 TSPAN18Q96SJ8 248 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 RUSC1Q9BVN2 902 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 PABPC3Q9H361 631 aaKnown RBP10□□□□□ -0.81
CPSF7-217ENST00000537162 FBXL12Q9NXK8 326 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 SEPT10Q9P0V9 454 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 ERRFI1Q9UJM3 462 aaPredicted RBP10□□□□□ -0.81
CPSF7-217ENST00000537162 TACC2O95359 2948 aa10□□□□□ -0.81
CPSF7-217ENST00000537162 MYH11P35749 1972 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.99□□□□□ -0.81
CPSF7-217ENST00000537162 K7ESM1 405 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 PIAS2O75928 621 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 RPA1P27694 616 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 CCR5P51681 352 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 WNT7BP56706 349 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 ZBTB16Q05516 673 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 ZNF177Q13360 481 aaPredicted RBP9.99□□□□□ -0.81
CPSF7-217ENST00000537162 MRPL49Q13405 166 aaKnown RBP9.99□□□□□ -0.81
CPSF7-217ENST00000537162 ESPL1Q14674 2120 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 TTC31Q49AM3 519 aaPredicted RBP9.99□□□□□ -0.81
CPSF7-217ENST00000537162 FNDC3BQ53EP0 1204 aaKnown RBP9.99□□□□□ -0.81
CPSF7-217ENST00000537162 LACTB2Q53H82 288 aaPredicted RBP9.99□□□□□ -0.81
CPSF7-217ENST00000537162 HS1BP3Q53T59 392 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 SLC45A4Q5BKX6 768 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 C4orf50Q6ZRC1 276 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 RAB11FIP2Q7L804 512 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 ANKS1BQ7Z6G8 1248 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 ZC3H3Q8IXZ2 948 aaKnown RBP9.99□□□□□ -0.81
CPSF7-217ENST00000537162 OR2T34Q8NGX1 318 aa9.99□□□□□ -0.81
CPSF7-217ENST00000537162 SCAMP5Q8TAC9 235 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms