RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PARP6Q2NL67 630 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 HP1BP3Q5SSJ5 553 aaPredicted RBP14.02□□□□□ -0.16
SMG6-203ENST00000536871 HHATQ5VTY9 493 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 KIAA0319Q5VV43 1072 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 ZNF449Q6P9G9 518 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 C4orf50Q6ZRC1 276 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 RFX8Q6ZV50 586 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 LRRC6Q86X45 466 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 SMC1BQ8NDV3 1235 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 DCAKDQ8WVC6 231 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 VAT1Q99536 393 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 EPAS1Q99814 870 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 ADAM2Q99965 735 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 ELAC2Q9BQ52 826 aaKnown RBP14.02□□□□□ -0.16
SMG6-203ENST00000536871 CFHR5Q9BXR6 569 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 MIOSQ9NXC5 875 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 KANSL3Q9P2N6 904 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 FBXW11Q9UKB1 542 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 ARL2BPQ9Y2Y0 163 aa14.02□□□□□ -0.16
SMG6-203ENST00000536871 MYBPHLA2RUH7 354 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 CASTOR2A6NHX0 329 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 ERI2A8K979 691 aaKnown RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 AP3B1O00203 1094 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 BEST1O76090 585 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 OAS1P00973 400 aaKnown RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 MT-ND3P03897 115 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 ACTN3Q08043 901 aaPredicted RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 DPYSQ14117 519 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 MPP2Q14168 576 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 LRRC14Q15048 493 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 MTFR1Q15390 333 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 TTC39BQ5VTQ0 682 aaPredicted RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 OTUD1Q5VV17 481 aaPredicted RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 CAPN12Q6ZSI9 719 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 SLC7A14Q8TBB6 771 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 CCDC110Q8TBZ0 833 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 CCT6BQ92526 530 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 LPPQ93052 612 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 SUSD3Q96L08 255 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 EBNA1BP2Q99848 306 aaKnown RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 VPS11Q9H270 941 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 STARD13Q9Y3M8 1113 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 TRIP12Q14669 1992 aaPredicted RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 MEIS3P2A8K0S8 358 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 HHLA1C9JL84 531 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 TMEM189-UBE2V1I3L0A0 370 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 KRT38O76015 456 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 NCAM1P13591 858 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 KRT4P19013 534 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 ATXN1P54253 815 aaKnown RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 TPI1P60174 286 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 SLC10A2Q12908 348 aaPredicted RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 TRIM71Q2Q1W2 868 aaKnown RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 ANKRD20A2Q5SQ80 823 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 MAP3K21Q5TCX8 1036 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 ANKRD20A1Q5TYW2 823 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 ANKRD20A3Q5VUR7 823 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 GLB1LQ6UWU2 654 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 SPATA21Q7Z572 469 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 CAND1Q86VP6 1230 aaKnown RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 ECHDC2Q86YB7 292 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 C3orf58Q8NDZ4 430 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 GSDMBQ8TAX9 411 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 LRRC8CQ8TDW0 803 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 RSPH1Q8WYR4 309 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 MYLPFQ96A32 169 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 GLT1D1Q96MS3 346 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 WDR83Q9BRX9 315 aaKnown RBP14.01□□□□□ -0.17
SMG6-203ENST00000536871 FTHL17Q9BXU8 183 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 ADAM33Q9BZ11 813 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 ARHGAP39Q9C0H5 1083 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 KLHL14Q9P2G3 628 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 IGSF9Q9P2J2 1179 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 PCDHB8Q9UN66 801 aa14.01□□□□□ -0.17
SMG6-203ENST00000536871 H0YHG0 523 aa14□□□□□ -0.17
SMG6-203ENST00000536871 DCLK1O15075 740 aa14□□□□□ -0.17
SMG6-203ENST00000536871 APOEP02649 317 aa14□□□□□ -0.17
SMG6-203ENST00000536871 ALADP13716 330 aa14□□□□□ -0.17
SMG6-203ENST00000536871 MAP2K2P36507 400 aa14□□□□□ -0.17
SMG6-203ENST00000536871 CXCR3P49682 368 aa14□□□□□ -0.17
SMG6-203ENST00000536871 NDUFV1P49821 464 aa14□□□□□ -0.17
SMG6-203ENST00000536871 COG7P83436 770 aa14□□□□□ -0.17
SMG6-203ENST00000536871 GAD2Q05329 585 aa14□□□□□ -0.17
SMG6-203ENST00000536871 SEMA3BQ13214 749 aa14□□□□□ -0.17
SMG6-203ENST00000536871 DNAJC3Q13217 504 aa14□□□□□ -0.17
SMG6-203ENST00000536871 NME3Q13232 169 aa14□□□□□ -0.17
SMG6-203ENST00000536871 SYPL2Q5VXT5 272 aa14□□□□□ -0.17
SMG6-203ENST00000536871 OVOS1Q6IE37 1185 aa14□□□□□ -0.17
SMG6-203ENST00000536871 LRRC8BQ6P9F7 803 aa14□□□□□ -0.17
SMG6-203ENST00000536871 TRPM8Q7Z2W7 1104 aa14□□□□□ -0.17
SMG6-203ENST00000536871 ZNF598Q86UK7 904 aaKnown RBP14□□□□□ -0.17
SMG6-203ENST00000536871 MICALL1Q8N3F8 863 aa14□□□□□ -0.17
SMG6-203ENST00000536871 ZMIZ2Q8NF64 920 aa14□□□□□ -0.17
SMG6-203ENST00000536871 URGCPQ8TCY9 931 aa14□□□□□ -0.17
SMG6-203ENST00000536871 PXYLP1Q8TE99 480 aa14□□□□□ -0.17
SMG6-203ENST00000536871 MZB1Q8WU39 189 aa14□□□□□ -0.17
SMG6-203ENST00000536871 PITPNM3Q9BZ71 974 aa14□□□□□ -0.17
SMG6-203ENST00000536871 WDR6Q9NNW5 1121 aaKnown RBP14□□□□□ -0.17
SMG6-203ENST00000536871 RGS18Q9NS28 235 aa14□□□□□ -0.17
SMG6-203ENST00000536871 PIGVQ9NUD9 493 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms