RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 NEK11Q8NG66 645 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 TPSD1Q9BZJ3 242 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 FAM207AQ9NSI2 230 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 TJP2Q9UDY2 1190 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 STOML2Q9UJZ1 356 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 CLEC4EQ9ULY5 219 aa18.62■□□□□ 0.57
TNFRSF1A-209ENST00000536717 GFRA2O00451 464 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 DCLK1O15075 740 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 NCAM1P13591 858 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 KLK7P49862 253 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 SPEM2Q0P670 501 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PDCLQ13371 301 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 CACNA2D4Q7Z3S7 1137 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 GOLGA1Q92805 767 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 FAM149B1Q96BN6 582 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 ZC3H10Q96K80 434 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 ACOX2Q99424 681 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 TRIM5Q9C035 493 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PCDHGC3Q9UN70 934 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 NAALADL1Q9UQQ1 740 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 SLC27A6Q9Y2P4 619 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 DAAM1Q9Y4D1 1078 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 FHOD1Q9Y613 1164 aa18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 TNRC6BQ9UPQ9 1833 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-209ENST00000536717 SART1O43290 800 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 LATS1O95835 1130 aa18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 UCHL3P15374 230 aa18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PTK2Q05397 1052 aa18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PLK5Q496M5 336 aa18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 TRMT11Q7Z4G4 463 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 SLC47A2Q86VL8 602 aa18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 FAM71AQ8IYT1 594 aa18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 GPR161Q8N6U8 529 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 DQX1Q8TE96 717 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 DDI1Q8WTU0 396 aa18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PIWIL1Q96J94 861 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 POLMQ9NP87 494 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1A-209ENST00000536717 CYBBP04839 570 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 HOXD9P28356 352 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 NTSR1P30989 418 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 WASP42768 502 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 RING1Q06587 406 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 RAPGEF1Q13905 1077 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 GEN1Q17RS7 908 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 ADGRF1Q5T601 910 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 SYPL2Q5VXT5 272 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 BEND5Q7L4P6 421 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 PASD1Q8IV76 773 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 OLIG1Q8TAK6 271 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 CPXM1Q96SM3 734 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 NAA15Q9BXJ9 866 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 DUSP15Q9H1R2 295 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 USP18Q9UMW8 372 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 INVSQ9Y283 1065 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 LRP3O75074 770 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 ALDH1A2O94788 518 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 HOXB2P14652 356 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 TBX4P57082 545 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 POLR2FP61218 127 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 DRAP1Q14919 205 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 MPPE1Q53F39 396 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 NUGGCQ68CJ6 796 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 CHPFQ8IZ52 775 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 RMDN1Q96DB5 314 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 SLC39A13Q96H72 371 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 LOXL4Q96JB6 756 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 FCRL2Q96LA5 508 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 GABRG3Q99928 467 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 GANQ9H2C0 597 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 LHX5Q9H2C1 402 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 CD248Q9HCU0 757 aa18.59■□□□□ 0.57
TNFRSF1A-209ENST00000536717 A0A1W2PQF6 199 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TCRBV21S2A2A0A5A6 115 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TSPAN3O60637 253 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 EPN2O95208 641 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ID4P47928 161 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SGSHP51688 502 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 NNTQ13423 1086 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 USP39Q53GS9 565 aaKnown RBP18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 FAM133BQ5BKY9 247 aaKnown RBP18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TAC4Q86UU9 113 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 UNC45BQ8IWX7 931 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 C1orf131Q8NDD1 294 aaKnown RBP18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ADAM32Q8TC27 787 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PPP1R13BQ96KQ4 1090 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SERPINB11Q96P15 392 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 POPDC2Q9HBU9 364 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SEMA4GQ9NTN9 838 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 CACNA1AO00555 2505 aa18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 MUC22E2RYF6 1773 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ACSL4O60488 711 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 BCKDHBP21953 392 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SLC6A4P31645 630 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PBX1P40424 430 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TAF5Q15542 800 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 NADSYN1Q6IA69 706 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 KIAA1211LQ6NV74 962 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ANKS1BQ7Z6G8 1248 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 HMGB4Q8WW32 186 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 AZIN2Q96A70 460 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms