RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 SEPT8Q92599 483 aa23.47■■□□□ 1.35
HMGA2-206ENST00000536545 CASD1Q96PB1 797 aa23.47■■□□□ 1.35
HMGA2-206ENST00000536545 FRMD8Q9BZ67 464 aaPredicted RBP23.47■■□□□ 1.35
HMGA2-206ENST00000536545 PPCSQ9HAB8 311 aa23.47■■□□□ 1.35
HMGA2-206ENST00000536545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.47■■□□□ 1.35
HMGA2-206ENST00000536545 TRAPPC3O43617 180 aa23.46■■□□□ 1.35
HMGA2-206ENST00000536545 HNRNPH2P55795 449 aaKnown RBP23.46■■□□□ 1.35
HMGA2-206ENST00000536545 FAXCQ5TGI0 409 aa23.46■■□□□ 1.35
HMGA2-206ENST00000536545 CAPN12Q6ZSI9 719 aa23.46■■□□□ 1.35
HMGA2-206ENST00000536545 ABI1Q8IZP0 508 aa23.46■■□□□ 1.35
HMGA2-206ENST00000536545 RABEP2Q9H5N1 569 aa23.46■■□□□ 1.35
HMGA2-206ENST00000536545 ETNK1Q9HBU6 452 aa23.46■■□□□ 1.35
HMGA2-206ENST00000536545 PCDHB7Q9Y5E2 793 aa23.46■■□□□ 1.35
HMGA2-206ENST00000536545 HCAR3P49019 387 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 GATMP50440 423 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 ARL13BQ3SXY8 428 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 DCP1BQ8IZD4 617 aaKnown RBP23.45■■□□□ 1.34
HMGA2-206ENST00000536545 ATXN2LQ8WWM7 1075 aaKnown RBP23.45■■□□□ 1.34
HMGA2-206ENST00000536545 HTR3CQ8WXA8 447 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 MAML1Q92585 1016 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 APBB2Q92870 758 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 PHBP35232 272 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 GRIK1P39086 918 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 TPI1P60174 286 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 YWHAGP61981 247 aaKnown RBP eCLIP23.45■■□□□ 1.34
HMGA2-206ENST00000536545 EIF4EBP2Q13542 120 aaPredicted RBP23.45■■□□□ 1.34
HMGA2-206ENST00000536545 RASA2Q15283 850 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 VARS2Q5ST30 1063 aaKnown RBP23.45■■□□□ 1.34
HMGA2-206ENST00000536545 VSTM1Q6UX27 236 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 VPS52Q8N1B4 723 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 CRIPAKQ8N1N5 446 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 TET1Q8NFU7 2136 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 FUBP3Q96I24 572 aaKnown RBP eCLIP23.45■■□□□ 1.345e-9■■■□□ 16.9
HMGA2-206ENST00000536545 DEFB118Q96PH6 123 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 XPO6Q96QU8 1125 aaKnown RBP23.45■■□□□ 1.34
HMGA2-206ENST00000536545 LGMNQ99538 433 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 MARCH5Q9NX47 278 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 FETUBQ9UGM5 382 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 ADAM28Q9UKQ2 775 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 OGDHLQ9ULD0 1010 aa23.45■■□□□ 1.34
HMGA2-206ENST00000536545 PLXNA3P51805 1871 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 MYO16Q9Y6X6 1858 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 A0A0A0MRY4 1105 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 TADA2AO75478 443 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 METTL18O95568 372 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 TPSB2P20231 275 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 ZNF135P52742 658 aaPredicted RBP23.44■■□□□ 1.34
HMGA2-206ENST00000536545 SEC24CP53992 1094 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 MTM1Q13496 603 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 PDK1Q15118 436 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 MTFR1Q15390 333 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 TPSAB1Q15661 275 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 NLRP14Q86W24 1093 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 IGDCC3Q8IVU1 814 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 AGGF1Q8N302 714 aaeCLIP23.44■■□□□ 1.342e-19■□□□□ 9.9
HMGA2-206ENST00000536545 MCUQ8NE86 351 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 SPATA13Q96N96 652 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 ACSS3Q9H6R3 686 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 ABI2Q9NYB9 513 aaPredicted RBP23.44■■□□□ 1.34
HMGA2-206ENST00000536545 RABGEF1Q9UJ41 708 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 ACTL7BQ9Y614 415 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 TEX264Q9Y6I9 313 aa23.44■■□□□ 1.34
HMGA2-206ENST00000536545 TTC3P53804 2025 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 PQBP1O60828 265 aaKnown RBP23.43■■□□□ 1.34
HMGA2-206ENST00000536545 CREB1P16220 341 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 ERCC2P18074 760 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 SSTR1P30872 391 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 GLUD2P49448 558 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 MRPL58Q14197 206 aaKnown RBP23.43■■□□□ 1.34
HMGA2-206ENST00000536545 TMED2Q15363 201 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 NFE2Q16621 373 aaPredicted RBP23.43■■□□□ 1.34
HMGA2-206ENST00000536545 SYCP2LQ5T4T6 812 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 TADA2BQ86TJ2 420 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 TKTL2Q9H0I9 626 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 WDCPQ9H6R7 721 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 TBK1Q9UHD2 729 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 SLC24A2Q9UI40 661 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 CHMP2BQ9UQN3 213 aa23.43■■□□□ 1.34
HMGA2-206ENST00000536545 FOXO6A8MYZ6 492 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 NDUFAB1O14561 156 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 PPP1R12AO14974 1030 aaPredicted RBP23.42■■□□□ 1.34
HMGA2-206ENST00000536545 IRAK2O43187 625 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 APRTP07741 180 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 ELK3P41970 407 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 MAGEA3P43357 314 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 SEMA5AQ13591 1074 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 ARHGEF18Q6ZSZ5 1173 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 SCD5Q86SK9 330 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 CAND1Q86VP6 1230 aaKnown RBP23.42■■□□□ 1.34
HMGA2-206ENST00000536545 SMOC2Q9H3U7 446 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 PPANQ9NQ55 473 aaKnown RBP23.42■■□□□ 1.34
HMGA2-206ENST00000536545 ABCC13Q9NSE7 274 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 RAD54BQ9Y620 910 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 SCN5AQ14524 2016 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 SLC11A1P49279 550 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 PGFP49763 221 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 ZNF534Q76KX8 674 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 NPAS4Q8IUM7 802 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 SCN4BQ8IWT1 228 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 NETO2Q8NC67 525 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms