RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 CBX8Q9HC52 389 aa13.7□□□□□ -0.22
PRKDC-206ENST00000536429 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
PRKDC-206ENST00000536429 CALCOCO1Q9P1Z2 691 aa13.7□□□□□ -0.22
PRKDC-206ENST00000536429 MMP17Q9ULZ9 603 aa13.7□□□□□ -0.22
PRKDC-206ENST00000536429 SMG5Q9UPR3 1016 aaKnown RBP13.7□□□□□ -0.22
PRKDC-206ENST00000536429 SMTNL1A8MU46 457 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 IRAK2O43187 625 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 ACSL4O60488 711 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 TRUB2O95900 331 aaKnown RBP13.69□□□□□ -0.22
PRKDC-206ENST00000536429 MOCS2O96007 188 aaPredicted RBP13.69□□□□□ -0.22
PRKDC-206ENST00000536429 NOMO3P69849 1222 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 FMO1Q01740 532 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 RING1Q06587 406 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 ZSCAN23Q3MJ62 389 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 DCAF6Q58WW2 860 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 ZC3H12AQ5D1E8 599 aaKnown RBP13.69□□□□□ -0.22
PRKDC-206ENST00000536429 ADGRF1Q5T601 910 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 OTUD1Q5VV17 481 aaPredicted RBP13.69□□□□□ -0.22
PRKDC-206ENST00000536429 NAA35Q5VZE5 725 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 ZNF513Q8N8E2 541 aaPredicted RBP13.69□□□□□ -0.22
PRKDC-206ENST00000536429 WFDC5Q8TCV5 224 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 IPO4Q8TEX9 1081 aaKnown RBP13.69□□□□□ -0.22
PRKDC-206ENST00000536429 DDI1Q8WTU0 396 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 CPA5Q8WXQ8 436 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
PRKDC-206ENST00000536429 NOX5Q96PH1 765 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 SPAG5Q96R06 1193 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 PCDHB18PQ96TA0 734 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 NUCKS1Q9H1E3 243 aaKnown RBP13.69□□□□□ -0.22
PRKDC-206ENST00000536429 SEMA4AQ9H3S1 761 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 SYNCQ9H7C4 482 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 ASNSD1Q9NWL6 643 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 TLR6Q9Y2C9 796 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 STARD13Q9Y3M8 1113 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 FANCMQ8IYD8 2048 aa13.69□□□□□ -0.22
PRKDC-206ENST00000536429 ZNF292O60281 2723 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 SYNJ2BP-COX16A0A087WUM0 186 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 HSF2BPO75031 334 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 APBB3O95704 486 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 LATS1O95835 1130 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 CYBBP04839 570 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 GLI1P08151 1106 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 TFE3P19532 575 aaPredicted RBP13.68□□□□□ -0.22
PRKDC-206ENST00000536429 STAT1P42224 750 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 GABRB2P47870 512 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 CDR2Q01850 454 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 SLC6A3Q01959 620 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 ARID5AQ03989 594 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 NNTQ13423 1086 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 CRY1Q16526 586 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 MPPE1Q53F39 396 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 PIK3R6Q5UE93 754 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 NUGGCQ68CJ6 796 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 TMEM215Q68D42 235 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 ANO7Q6IWH7 933 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 PRR23BQ6ZRT6 265 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 SLC26A9Q7LBE3 791 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 XYLT1Q86Y38 959 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 UNC45BQ8IWX7 931 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 MDGA1Q8NFP4 955 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 TSTD1Q8NFU3 115 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 TMA16Q96EY4 203 aaKnown RBP13.68□□□□□ -0.22
PRKDC-206ENST00000536429 TPSD1Q9BZJ3 242 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 FAM204AQ9H8W3 233 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 COX16Q9P0S2 106 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 SLC27A6Q9Y2P4 619 aa13.68□□□□□ -0.22
PRKDC-206ENST00000536429 KIAA1549LQ6ZVL6 1849 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 A0A1B0GTH6 734 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 WASH3PC4AMC7 463 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 DCLK1O15075 740 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 AXIN1O15169 862 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 DAB1O75553 588 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 LSM8O95777 96 aaKnown RBP13.67□□□□□ -0.22
PRKDC-206ENST00000536429 CYP1A1P04798 512 aaPredicted RBP13.67□□□□□ -0.22
PRKDC-206ENST00000536429 HLA-FP30511 346 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 SLC11A2P49281 568 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 RNASE9P60153 205 aaKnown RBP13.67□□□□□ -0.22
PRKDC-206ENST00000536429 RPS24P62847 133 aaKnown RBP13.67□□□□□ -0.22
PRKDC-206ENST00000536429 CDK17Q00537 523 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 SIM2Q14190 667 aaPredicted RBP13.67□□□□□ -0.22
PRKDC-206ENST00000536429 PREPLQ4J6C6 727 aaPredicted RBP13.67□□□□□ -0.22
PRKDC-206ENST00000536429 EFHC1Q5JVL4 640 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 RNF43Q68DV7 783 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 TRNP1Q6NT89 227 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 PHLDB2Q86SQ0 1253 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 ERICH1Q86X53 443 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 CAMKK1Q8N5S9 505 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 ZNF397Q8NF99 534 aaPredicted RBP13.67□□□□□ -0.22
PRKDC-206ENST00000536429 CCDC26Q8TAB7 109 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 SLC30A5Q8TAD4 765 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 SORCS1Q8WY21 1168 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 BAP1Q92560 729 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 C18orf8Q96DM3 657 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 DDIT4Q9NX09 232 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 CACNA2D2Q9NY47 1150 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 INVSQ9Y283 1065 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 SDK1Q7Z5N4 2213 aa13.67□□□□□ -0.22
PRKDC-206ENST00000536429 DMXL1Q9Y485 3027 aa13.66□□□□□ -0.22
PRKDC-206ENST00000536429 CCDC163A0A0D9SF12 145 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms