RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 NNTQ13423 1086 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 PPP2R5DQ14738 602 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 LLGL1Q15334 1064 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 SKIV2LQ15477 1246 aaKnown RBP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 BRMS1LQ5PSV4 323 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 AADACL2Q6P093 401 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 POLNQ7Z5Q5 900 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 TTC16Q8NEE8 873 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 KIF18AQ8NI77 898 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 ADAMTS19Q8TE59 1207 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 ZFRQ96KR1 1074 aaKnown RBP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 SIK2Q9H0K1 926 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 DHX35Q9H5Z1 703 aaKnown RBP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 DDX56Q9NY93 547 aaKnown RBP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 SLC12A6Q9UHW9 1150 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 XPO7Q9UIA9 1087 aaKnown RBP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 SNX12Q9UMY4 172 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 SNX10Q9Y5X0 201 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 CPQQ9Y646 472 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 SOBPA7XYQ1 873 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 H3BQ06 376 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 PAGE1O75459 146 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 IGLV3-27P01718 113 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 KLKB1P03952 638 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 FOSL2P15408 326 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 PRLRP16471 622 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 L1CAMP32004 1257 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 AVPR1AP37288 418 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 CDH6P55285 790 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 DCAF12L1Q5VU92 463 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 ANKS1BQ7Z6G8 1248 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 DENND1CQ8IV53 801 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 ARID3BQ8IVW6 561 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 UNC45BQ8IWX7 931 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 KATNAL2Q8IYT4 538 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 RCOR2Q8IZ40 523 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 ATP6V0D2Q8N8Y2 350 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 TEKT4Q8WW24 435 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 FGF13Q92913 245 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 USP13Q92995 863 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 NTAN1Q96AB6 310 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 HAPLN3Q96S86 360 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 OSBPL9Q96SU4 736 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.95□□□□□ -0.5
CDCA3-206ENST00000536241 TMEM51Q9NW97 253 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 AP4E1Q9UPM8 1137 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 CCL26Q9Y258 94 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 SAR1BQ9Y6B6 198 aa11.95□□□□□ -0.5
CDCA3-206ENST00000536241 GOLGA6L7A0A1B0GV03 622 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 LRRD1A4D1F6 860 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 FAM72CH0Y354 149 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 SCAMP3O14828 347 aaKnown RBP11.94□□□□□ -0.5
CDCA3-206ENST00000536241 ZNF185O15231 689 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 URI1O94763 535 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-206ENST00000536241 APOEP02649 317 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 KRT1P04264 644 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 CD48P09326 243 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 GGCXP38435 758 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 HARS2P49590 506 aaKnown RBP11.94□□□□□ -0.5
CDCA3-206ENST00000536241 ARSEP51690 589 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 AIF1P55008 147 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 MLLT6P55198 1093 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-206ENST00000536241 MMRN1Q13201 1228 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 ODF2Q5BJF6 829 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 PPP6R3Q5H9R7 873 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-206ENST00000536241 EFHC2Q5JST6 749 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 FAM72AQ5TYM5 149 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 NUGGCQ68CJ6 796 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 FAM72DQ6L9T8 149 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 MFSD7Q6UXD7 560 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 GET4Q7L5D6 327 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-206ENST00000536241 FAM72BQ86X60 149 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 NPAS3Q8IXF0 933 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 ST13P5Q8NFI4 369 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-206ENST00000536241 EXD1Q8NHP7 514 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 ZSCAN18Q8TBC5 510 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-206ENST00000536241 COG1Q8WTW3 980 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 PLD4Q96BZ4 506 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 PBKQ96KB5 322 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 RIPOR3Q96MK2 946 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 KCTD15Q96SI1 283 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-206ENST00000536241 OSBPL2Q9H1P3 480 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 PCDH18Q9HCL0 1135 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 TDP1Q9NUW8 608 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 OR12D3Q9UGF7 316 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 CD207Q9UJ71 328 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 ZMYM5Q9UJ78 669 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 CLUHO75153 1309 aa11.94□□□□□ -0.5
CDCA3-206ENST00000536241 C3orf70A6NLC5 250 aaPredicted RBP11.93□□□□□ -0.5
CDCA3-206ENST00000536241 LEFTY2O00292 366 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 CREB3O43889 395 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 CEP104O60308 925 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 ACSL4O60488 711 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 TCP1P17987 556 aaKnown RBP11.93□□□□□ -0.5
CDCA3-206ENST00000536241 KCNA5P22460 613 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 IL4RP24394 825 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 CORO1AP31146 461 aaKnown RBP11.93□□□□□ -0.5
CDCA3-206ENST00000536241 MTHFRP42898 656 aa11.93□□□□□ -0.5
CDCA3-206ENST00000536241 AMPD2Q01433 879 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms