RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SLC4A5Q9BY07 1137 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 DNAI2Q9GZS0 605 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 NDE1Q9NXR1 346 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 BCLAF3A2AJT9 711 aaKnown RBP18.52■□□□□ 0.56
RAB40C-203ENST00000535977 APOL1O14791 398 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 BANF1O75531 89 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 MT-ND3P03897 115 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 ZNF24P17028 368 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 RGS2P41220 211 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 ZNF200P98182 395 aaPredicted RBP18.52■□□□□ 0.56
RAB40C-203ENST00000535977 SLC6A3Q01959 620 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 TMEM110Q86TL2 294 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 UNC93AQ86WB7 457 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 BANPQ8N9N5 519 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 MZB1Q8WU39 189 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 TUBB6Q9BUF5 446 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 HESX1Q9UBX0 185 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 TEX264Q9Y6I9 313 aa18.52■□□□□ 0.56
RAB40C-203ENST00000535977 TCRBV7S3A2A0A539 114 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 MDM4O15151 490 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 STRNO43815 780 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 ITGBL1O95965 494 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 PFKMP08237 780 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 VARSP26640 1264 aaKnown RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 SDC4P31431 198 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 GAD2Q05329 585 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 PCBP1Q15365 356 aaKnown RBP eCLIP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 GOLGA7BQ2TAP0 167 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 CCDC14Q49A88 953 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 PKDCCQ504Y2 493 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 DPH6Q7L8W6 267 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 PLD5Q8N7P1 536 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 FAF2Q96CS3 445 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 C16orf70Q9BSU1 422 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 USP29Q9HBJ7 922 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 DDX18Q9NVP1 670 aaKnown RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 RNF181Q9P0P0 153 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 A0A0G2JND7 137 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 H3BRB1 525 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 TRDMT1O14717 391 aaKnown RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 CSDE1O75534 798 aaKnown RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 ZFXP17010 805 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 CYP3A5P20815 502 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 ELK3P41970 407 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 MMRN1Q13201 1228 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 BTG3Q14201 252 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 LRRC52Q8N7C0 313 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 SLC44A1Q8WWI5 657 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 LRRC39Q96DD0 335 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 MRRFQ96E11 262 aaKnown RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 WDR83Q9BRX9 315 aaKnown RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 ZNF670Q9BS34 389 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 TUT1Q9H6E5 874 aaKnown RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 FBXO6Q9NRD1 293 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 FAM155BO75949 473 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 TROVE2P10155 538 aaKnown RBP eCLIP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 ESRRAP11474 423 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 CDK4P11802 303 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 SCNN1AP37088 669 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 MAGEA6P43360 314 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 BCAR1P56945 870 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 SLC9A4Q6AI14 798 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 OLFML1Q6UWY5 402 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 MAMDC4Q6UXC1 1216 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 NCCRP1Q6ZVX7 275 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 RAPH1Q70E73 1250 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 USP50Q70EL3 339 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 ARCQ7LC44 396 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 DGCR14Q96DF8 476 aaKnown RBP18.51■□□□□ 0.55
RAB40C-203ENST00000535977 KLC2Q9H0B6 622 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 ARHGEF38Q9NXL2 777 aa18.51■□□□□ 0.55
RAB40C-203ENST00000535977 VILLO15195 856 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 INHBAP08476 426 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 LGSNQ5TDP6 509 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 IRGQQ8WZA9 623 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 SBF1O95248 1867 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 PGM3O95394 542 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 RARBP10826 455 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 PHEXP78562 749 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 ITGA9Q13797 1035 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 GRM2Q14416 872 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 C15orf59Q2T9L4 293 aaPredicted RBP18.5■□□□□ 0.55
RAB40C-203ENST00000535977 C9orf131Q5VYM1 1079 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 TRNP1Q6NT89 227 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 NPNTQ6UXI9 565 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 B3GNT6Q6ZMB0 384 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 BEST2Q8NFU1 509 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 SLC35F5Q8WV83 523 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 PPM1HQ9ULR3 514 aa18.5■□□□□ 0.55
RAB40C-203ENST00000535977 RRN3P2A6NIE6 340 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 F8W8V4 182 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 RAP1GDS1P52306 607 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 EMP3P54852 163 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 HNRNPDQ14103 355 aaKnown RBP18.49■□□□□ 0.55
RAB40C-203ENST00000535977 SH3PXD2AQ5TCZ1 1133 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 ARHGAP17Q68EM7 881 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 RIPOR1Q6ZS17 1223 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 MCUQ8NE86 351 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 TCP10LQ8TDR4 215 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms