RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 MRGPREQ86SM8 312 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 RASGRP3Q8IV61 690 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 LIX1LQ8IVB5 337 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 ULK2Q8IYT8 1036 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 NRSN1Q8IZ57 195 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 ABRAQ8N0Z2 381 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 TTC5Q8N0Z6 440 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 SIRT6Q8N6T7 355 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 CELF5Q8N6W0 485 aaKnown RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 SSH3Q8TE77 659 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 OVCA2Q8WZ82 227 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 DCPSQ96C86 337 aaKnown RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 SCLT1Q96NL6 688 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 EIF3CQ99613 913 aaKnown RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 VN1R3Q9BXE9 311 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 NYXQ9GZU5 481 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 SLC25A32Q9H2D1 315 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 CHST12Q9NRB3 414 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 RNF186Q9NXI6 227 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 GPRC5BQ9NZH0 403 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 RGL1Q9NZL6 768 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 DKK2Q9UBU2 259 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 TAGLN3Q9UI15 199 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 SLC39A10Q9ULF5 831 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 ADAMTSL1Q8N6G6 1762 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 A0A0C4DFX4 3053 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 KDRP35968 1356 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 COL15A1P39059 1388 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 THSD7BQ9C0I4 1608 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 MAST3O60307 1309 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 CENPVL1A0A0U1RR11 272 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 A8MVJ9 347 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 KIAA0355O15063 1070 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 TMPRSS11DO60235 418 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 URI1O94763 535 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 ESRRBO95718 433 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 ITGA2BP08514 1039 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 C1SP09871 688 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 FAM163BP0C2L3 166 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 HARSP12081 509 aaKnown RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 PPP3CBP16298 524 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 ZFXP17010 805 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 EGR1P18146 543 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 ABCB4P21439 1286 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 GATA3P23771 443 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 EPS15P42566 896 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 PDE1AP54750 535 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 ALDH18A1P54886 795 aaKnown RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 EIF5P55010 431 aaKnown RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 FKBP1BP68106 108 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 HTRA4P83105 476 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 SLC25A3Q00325 362 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 GPS1Q13098 491 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 CBFBQ13951 182 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 SF3B3Q15393 1217 aaKnown RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 PUM3Q15397 648 aaKnown RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 CDSNQ15517 529 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 NPY5RQ15761 445 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 TBCCQ15814 346 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 MPEG1Q2M385 716 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 SLC35G1Q2M3R5 365 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 ZACNQ401N2 412 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 CCDC38Q502W7 563 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 PRR5LQ6MZQ0 368 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 NBPF5PQ86XG9 351 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 CCDC117Q8IWD4 279 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 SMAP1Q8IYB5 467 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 EXOC8Q8IYI6 725 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 FSTL5Q8N475 847 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 AMER2Q8N7J2 671 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 ABHD11Q8NFV4 315 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 MBD3L2Q8NHZ7 208 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 PPM1EQ8WY54 764 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 KIAA1191Q96A73 305 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 Q96MF0 132 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 CINPQ9BW66 212 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 TTLL2Q9BWV7 592 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 KRTAP9-3Q9BYQ3 159 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 WDR11Q9BZH6 1224 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 TOR3AQ9H497 397 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 ZNF768Q9H5H4 540 aaKnown RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 ARHGEF3Q9NR81 526 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 RXFP3Q9NSD7 469 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 TMLHEQ9NVH6 421 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 DNMT3BQ9UBC3 853 aaKnown RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 HERC5Q9UII4 1024 aaKnown RBP3.77□□□□□ -1.81
SNHG1-202ENST00000535689 SERTAD3Q9UJW9 196 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 HPSEQ9Y251 543 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 RIPOR2Q9Y4F9 1068 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 HS3ST4Q9Y661 456 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 ANKRD31Q8N7Z5 1873 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 KIF20BQ96Q89 1820 aa3.77□□□□□ -1.81
SNHG1-202ENST00000535689 SCN11AQ9UI33 1791 aa3.76□□□□□ -1.81
SNHG1-202ENST00000535689 UNC119BA6NIH7 251 aa3.76□□□□□ -1.81
SNHG1-202ENST00000535689 TTC34A8MYJ7 566 aa3.76□□□□□ -1.81
SNHG1-202ENST00000535689 F8W8V4 182 aa3.76□□□□□ -1.81
SNHG1-202ENST00000535689 H7C4K7 107 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms