RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ACTN3Q08043 901 aaPredicted RBP12.78□□□□□ -0.36
SCARB1-204ENST00000535005 EIF4EBP2Q13542 120 aaPredicted RBP12.78□□□□□ -0.36
SCARB1-204ENST00000535005 C11orf63Q6NUN7 778 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 PDZD4Q76G19 769 aaPredicted RBP12.78□□□□□ -0.36
SCARB1-204ENST00000535005 STRADAQ7RTN6 431 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 SLFN11Q7Z7L1 901 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 GSPT2Q8IYD1 628 aaKnown RBP12.78□□□□□ -0.36
SCARB1-204ENST00000535005 SHKBP1Q8TBC3 707 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 RNF139Q8WU17 664 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 EDEM1Q92611 657 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 MRPS31Q92665 395 aaKnown RBP12.78□□□□□ -0.36
SCARB1-204ENST00000535005 GCNAQ96QF7 691 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 SMOC2Q9H3U7 446 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 CLDND1Q9NY35 253 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 ZMYM5Q9UJ78 669 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 CLUHO75153 1309 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 CLGNO14967 610 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 ZNF185O15231 689 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 TLR5O60602 858 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 MOCS3O95396 460 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 OLFM2O95897 454 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 FAM107AO95990 144 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 OAS1P00973 400 aaKnown RBP12.78□□□□□ -0.36
SCARB1-204ENST00000535005 PSMA2P25787 234 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 DDX6P26196 483 aaKnown RBP eCLIP12.78□□□□□ -0.365e-18■■□□□ 12.4
SCARB1-204ENST00000535005 CCR2P41597 374 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 DLX2Q07687 328 aaPredicted RBP12.78□□□□□ -0.36
SCARB1-204ENST00000535005 PREPLQ4J6C6 727 aaPredicted RBP12.78□□□□□ -0.36
SCARB1-204ENST00000535005 FBXW10Q5XX13 1052 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 LRRC57Q8N9N7 239 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 DQX1Q8TE96 717 aaKnown RBP12.78□□□□□ -0.36
SCARB1-204ENST00000535005 CFAP57Q96MR6 1250 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 ATXN3LQ9H3M9 355 aa12.78□□□□□ -0.36
SCARB1-204ENST00000535005 DMGDHQ9UI17 866 aaKnown RBP12.78□□□□□ -0.36
SCARB1-204ENST00000535005 A0A1W2PRU2 124 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 TRUB2O95900 331 aaKnown RBP12.77□□□□□ -0.37
SCARB1-204ENST00000535005 F9P00740 461 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 DESP17661 470 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 NR1D1P20393 614 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 ATP5C1P36542 298 aaKnown RBP12.77□□□□□ -0.37
SCARB1-204ENST00000535005 SLC1A1P43005 524 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 NTHL1P78549 312 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 IFFO1Q0D2I5 559 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 MESDQ14696 234 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 OTUD1Q5VV17 481 aaPredicted RBP12.77□□□□□ -0.37
SCARB1-204ENST00000535005 SYCE1Q8N0S2 351 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.77□□□□□ -0.37
SCARB1-204ENST00000535005 ZNF473Q8WTR7 871 aaKnown RBP12.77□□□□□ -0.37
SCARB1-204ENST00000535005 BTBD6Q96KE9 485 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 ATP6V1G3Q96LB4 118 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 ZIM3Q96PE6 472 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 TBCBQ99426 244 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 CCSER2Q9H7U1 834 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 WDR6Q9NNW5 1121 aaKnown RBP12.77□□□□□ -0.37
SCARB1-204ENST00000535005 CAPN6Q9Y6Q1 641 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 MYO16Q9Y6X6 1858 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 NOTCH4Q99466 2003 aa12.77□□□□□ -0.37
SCARB1-204ENST00000535005 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.76□□□□□ -0.37
SCARB1-204ENST00000535005 GOLGA6L10A6NI86 522 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 NRG2O14511 850 aaPredicted RBP12.76□□□□□ -0.37
SCARB1-204ENST00000535005 COCHO43405 550 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 FOSL2P15408 326 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 PCK1P35558 622 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 MDH1P40925 334 aaKnown RBP12.76□□□□□ -0.37
SCARB1-204ENST00000535005 SULT1E1P49888 294 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 PITX1P78337 314 aaPredicted RBP12.76□□□□□ -0.37
SCARB1-204ENST00000535005 SLC5A9Q2M3M2 681 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 C15orf59Q2T9L4 293 aaPredicted RBP12.76□□□□□ -0.37
SCARB1-204ENST00000535005 ARHGAP15Q53QZ3 475 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 ATAT1Q5SQI0 421 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 C10orf120Q5SQS8 335 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 CES5AQ6NT32 575 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 ARFGAP1Q8N6T3 406 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 GPATCH11Q8N954 259 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 TSEN2Q8NCE0 465 aaKnown RBP12.76□□□□□ -0.37
SCARB1-204ENST00000535005 GIMAP7Q8NHV1 300 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 ARL8AQ96BM9 186 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 TCEAL4Q96EI5 215 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 GDAP1L1Q96MZ0 367 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 SERPINB11Q96P15 392 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 ADAM33Q9BZ11 813 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 TASP1Q9H6P5 420 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 DNMT3LQ9UJW3 386 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 MRPS23Q9Y3D9 190 aaKnown RBP12.76□□□□□ -0.37
SCARB1-204ENST00000535005 ALG6Q9Y672 507 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 C2orf78A6NCI8 922 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 M0QYT0 321 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 IRAK2O43187 625 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 PALMO75781 387 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 RNF8O76064 485 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 TBX18O95935 607 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 TFE3P19532 575 aaPredicted RBP12.76□□□□□ -0.37
SCARB1-204ENST00000535005 WEE1P30291 646 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 GBP1P32455 592 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 HSPA9P38646 679 aaKnown RBP12.76□□□□□ -0.37
SCARB1-204ENST00000535005 MTHFRP42898 656 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 KPNA1P52294 538 aaPredicted RBP12.76□□□□□ -0.37
SCARB1-204ENST00000535005 CYP4F8P98187 520 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 WLSQ5T9L3 541 aa12.76□□□□□ -0.37
SCARB1-204ENST00000535005 TXNDC8Q6A555 127 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms