RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 SLC2A13Q96QE2 648 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.91□□□□□ -0.18
CAPN1-227ENST00000533909 RAB23Q9ULC3 237 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 MYO6Q9UM54 1294 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 PAXBP1Q9Y5B6 917 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 WDR87Q6ZQQ6 2873 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 ATG2BQ96BY7 2078 aa13.91□□□□□ -0.18
CAPN1-227ENST00000533909 RIF1Q5UIP0 2472 aaKnown RBP13.9□□□□□ -0.18
CAPN1-227ENST00000533909 ZBTB24O43167 697 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-227ENST00000533909 IRAK2O43187 625 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 IGLV3-27P01718 113 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 CCR1P32246 355 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 NOS2P35228 1153 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 GABRB2P47870 512 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 FNTBP49356 437 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 FMO1Q01740 532 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 MESP2Q0VG99 397 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 NR1I3Q14994 352 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 E2F5Q15329 346 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 ASIC2Q16515 512 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 HSF5Q4G112 596 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-227ENST00000533909 ZC3H12AQ5D1E8 599 aaKnown RBP13.9□□□□□ -0.18
CAPN1-227ENST00000533909 EOGTQ5NDL2 527 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 SFMBT2Q5VUG0 894 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 FYB2Q5VWT5 728 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 MMS22LQ6ZRQ5 1243 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 LONP2Q86WA8 852 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 CHSY1Q86X52 802 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 FAM217AQ8IXS0 508 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 CAMKK1Q8N5S9 505 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 ZNF513Q8N8E2 541 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-227ENST00000533909 HJURPQ8NCD3 748 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-227ENST00000533909 ZNF397Q8NF99 534 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-227ENST00000533909 TSTD1Q8NFU3 115 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 KCNV2Q8TDN2 545 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 UCMAQ8WVF2 138 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 AZIN2Q96A70 460 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 BTN2A3PQ96KV6 586 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 FCRL2Q96LA5 508 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-227ENST00000533909 HHIPQ96QV1 700 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 PHOX2BQ99453 314 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 AGPAT1Q99943 283 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 SLC2A11Q9BYW1 496 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.9□□□□□ -0.18
CAPN1-227ENST00000533909 RRN3Q9NYV6 651 aa13.9□□□□□ -0.18
CAPN1-227ENST00000533909 A0A0A0MRY4 1105 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 ANKRD62A6NC57 917 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 LRRC53A6NM62 1247 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 M0QYT0 321 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 TRIM24O15164 1050 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 GFRA3O60609 400 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 TBL1XO60907 577 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 ALDH1A2O94788 518 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 APBB3O95704 486 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 CYP1A1P04798 512 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-227ENST00000533909 CALB1P05937 261 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 CHRNB2P17787 502 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 TNFAIP3P21580 790 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 SCNN1AP37088 669 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 MATKP42679 507 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 SULT1E1P49888 294 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 MRE11P49959 708 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 DGKEP52429 567 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 MTA1Q13330 715 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 C2CD6Q53TS8 623 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 RFWD3Q6PCD5 774 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 LRSAM1Q6UWE0 723 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 CEP68Q76N32 757 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 ANKS1BQ7Z6G8 1248 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 ALYREFQ86V81 257 aaKnown RBP13.89□□□□□ -0.19
CAPN1-227ENST00000533909 XYLT1Q86Y38 959 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 SFTPA1Q8IWL2 248 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 CHPFQ8IZ52 775 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 PHTF2Q8N3S3 785 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 ZNF557Q8N988 423 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-227ENST00000533909 TXNDC5Q8NBS9 432 aaKnown RBP13.89□□□□□ -0.19
CAPN1-227ENST00000533909 SLC30A5Q8TAD4 765 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 HINFPQ9BQA5 517 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 C11orf70Q9BRQ4 267 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 NUP58Q9BVL2 599 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 IRX2Q9BZI1 471 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-227ENST00000533909 POLMQ9NP87 494 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-227ENST00000533909 C2orf42Q9NWW7 574 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 ADAM22Q9P0K1 906 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 STIM2Q9P246 746 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 BCCIPQ9P287 314 aaKnown RBP eCLIP13.89□□□□□ -0.19
CAPN1-227ENST00000533909 STOML2Q9UJZ1 356 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 MMP17Q9ULZ9 603 aa13.89□□□□□ -0.19
CAPN1-227ENST00000533909 GOLGA6L7A0A1B0GV03 622 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 PROB1E7EW31 1015 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 F5H5T6 163 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 K7ESF4 209 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 CBFA2T2O43439 604 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 F9P00740 461 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 LMNAP02545 664 aaKnown RBP13.88□□□□□ -0.19
CAPN1-227ENST00000533909 MMP8P22894 467 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 HOXA6P31267 233 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 PXNP49023 591 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-227ENST00000533909 CLEC16AQ2KHT3 1053 aa13.88□□□□□ -0.19
CAPN1-227ENST00000533909 EMC10Q5UCC4 262 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms